Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC004696.1-201ENST00000614345 607 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
LDLRP01130 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.21□□□□□ -1.9
LDLRP01130 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRP01130 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRP01130 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRP01130 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRP01130 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 XGY1-201ENST00000381172 446 ntBASIC3.2□□□□□ -1.9
LDLRP01130 RNU4-55P-201ENST00000410731 137 ntBASIC3.2□□□□□ -1.9
LDLRP01130 RNU2-62P-201ENST00000410868 191 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRP01130 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRP01130 ELOCP4-201ENST00000420090 333 ntBASIC3.2□□□□□ -1.9
LDLRP01130 MTCO1P20-201ENST00000425366 358 ntBASIC3.2□□□□□ -1.9
LDLRP01130 TIMM9P3-201ENST00000428659 274 ntBASIC3.2□□□□□ -1.9
LDLRP01130 RPL31P35-201ENST00000431058 377 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AL118496.2-201ENST00000448300 230 ntBASIC3.2□□□□□ -1.9
LDLRP01130 FDX1P2-201ENST00000450769 375 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.2□□□□□ -1.9
LDLRP01130 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRP01130 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 AL049714.1-201ENST00000466686 347 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC010631.1-201ENST00000474150 156 ntBASIC3.2□□□□□ -1.9
LDLRP01130 HMGB1P29-201ENST00000505659 499 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 SNORA70.18-201ENST00000516696 98 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRP01130 AL157687.1-201ENST00000554853 619 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRP01130 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.2□□□□□ -1.9
LDLRP01130 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.2□□□□□ -1.9
LDLRP01130 AC105224.1-201ENST00000587055 421 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC044792.1-201ENST00000593294 196 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AL035413.2-201ENST00000604801 525 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC087045.1-201ENST00000605856 382 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AP002826.1-201ENST00000608835 315 ntBASIC3.2□□□□□ -1.9
LDLRP01130 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.2□□□□□ -1.9
LDLRP01130 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 AC006386.2-201ENST00000624491 75 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC012005.1-201ENST00000624575 75 ntBASIC3.2□□□□□ -1.9
LDLRP01130 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LDLRP01130 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LDLRP01130 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.2□□□□□ -1.9
LDLRP01130 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRP01130 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRP01130 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRP01130 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LDLRP01130 OR5J1P-201ENST00000313544 939 ntBASIC3.19□□□□□ -1.9
LDLRP01130 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRP01130 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LDLRP01130 DEFB108F-201ENST00000344638 222 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
LDLRP01130 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 RNU6-483P-201ENST00000384088 108 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RNU6-1103P-201ENST00000384150 107 ntBASIC3.19□□□□□ -1.9
LDLRP01130 SNORA36C-201ENST00000384289 132 ntBASIC3.19□□□□□ -1.9
LDLRP01130 Y_RNA.535-201ENST00000384612 99 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RNU6-1009P-201ENST00000390996 107 ntBASIC3.19□□□□□ -1.9
LDLRP01130 SAR1AP2-201ENST00000392696 594 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC110754.1-201ENST00000399740 601 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RN7SKP284-201ENST00000411002 343 ntBASIC3.19□□□□□ -1.9
LDLRP01130 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
LDLRP01130 COTL1P1-201ENST00000422309 375 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 RPL7L1P10-201ENST00000427790 463 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRP01130 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC093156.1-201ENST00000440382 670 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.19□□□□□ -1.9
LDLRP01130 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 MTND1P12-201ENST00000455231 147 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RPL21P8-201ENST00000465083 535 ntBASIC3.19□□□□□ -1.9
LDLRP01130 S100A11P2-201ENST00000467589 312 ntBASIC3.19□□□□□ -1.9
LDLRP01130 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRP01130 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
LDLRP01130 Vault.3-201ENST00000516676 95 ntBASIC3.19□□□□□ -1.9
LDLRP01130 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms