Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.03□□□□□ -1.76
CNOT4O95628 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.03□□□□□ -1.76
CNOT4O95628 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.03□□□□□ -1.76
CNOT4O95628 AC005357.1-201ENST00000588399 301 ntBASIC4.03□□□□□ -1.76
CNOT4O95628 BPIFA4P-203ENST00000603168 689 ntBASIC4.03□□□□□ -1.76
CNOT4O95628 AL355297.3-201ENST00000604082 446 ntBASIC4.03□□□□□ -1.76
CNOT4O95628 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNOT4O95628 AC062037.2-201ENST00000610137 73 ntBASIC4.03□□□□□ -1.76
CNOT4O95628 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.03□□□□□ -1.76
CNOT4O95628 MIR4275-201ENST00000636486 87 ntBASIC4.03□□□□□ -1.76
CNOT4O95628 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.03□□□□□ -1.76
CNOT4O95628 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.03□□□□□ -1.76
CNOT4O95628 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNOT4O95628 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNOT4O95628 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.03□□□□□ -1.76
CNOT4O95628 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CNOT4O95628 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNOT4O95628 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC009812.4-201ENST00000569134 1805 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 DEFB108F-201ENST00000344638 222 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 Y_RNA.39-201ENST00000362620 98 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 RNU1-83P-201ENST00000363426 164 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 RNU6-1059P-201ENST00000363752 98 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 Y_RNA.257-201ENST00000364596 102 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 SNORA23-201ENST00000365128 182 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 Y_RNA.489-201ENST00000384410 101 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 SNORA41-201ENST00000384675 132 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC011276.1-201ENST00000469688 323 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 RPL23AP65-201ENST00000475608 468 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC107222.1-201ENST00000510899 637 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AL359273.1-201ENST00000510918 627 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 RN7SKP60-201ENST00000516985 239 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AC090151.1-201ENST00000520784 730 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 MIR3939-201ENST00000582614 106 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.02□□□□□ -1.77
CNOT4O95628 BDH2P1-201ENST00000602288 736 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AC020634.1-201ENST00000608701 549 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AC011944.2-201ENST00000624440 683 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 AL606534.2-204ENST00000635008 178 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
CNOT4O95628 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
CNOT4O95628 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.02□□□□□ -1.77
CNOT4O95628 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CNOT4O95628 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CNOT4O95628 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNOT4O95628 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNOT4O95628 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNOT4O95628 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNOT4O95628 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNOT4O95628 RNU5A-1-201ENST00000362698 116 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 Y_RNA.152-201ENST00000363578 100 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 RNA5SP509-201ENST00000364577 119 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 RNA5SP513-201ENST00000364648 118 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 Y_RNA.380-201ENST00000365663 111 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 RHOT1P2-201ENST00000366423 333 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 Y_RNA.485-201ENST00000384395 102 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 RNU6-45P-201ENST00000384471 107 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 SNORA48.7-201ENST00000391302 135 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 PTMAP5-201ENST00000393073 333 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC096664.2-201ENST00000411843 406 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC011933.1-201ENST00000413334 321 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.01□□□□□ -1.77
CNOT4O95628 AL160275.3-201ENST00000423876 471 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 RPL27AP8-201ENST00000424277 446 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 UBE2V1P4-201ENST00000425374 344 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AL645568.3-201ENST00000433683 316 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC112492.4-201ENST00000456549 352 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 RNU6-840P-201ENST00000517275 65 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms