Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RPS20P15-201ENST00000412792 311 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 MTCO3P46-201ENST00000425787 232 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.98□□□□□ -2.25
ABCA1O95477 AC104073.1-201ENST00000451988 151 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.98□□□□□ -2.25
ABCA1O95477 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
ABCA1O95477 AC115989.2-201ENST00000578640 563 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AC015688.2-201ENST00000584523 262 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA1O95477 AL049641.1-201ENST00000441055 1948 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA1O95477 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
ABCA1O95477 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA1O95477 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.98□□□□□ -2.25
ABCA1O95477 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 MTND4LP10-201ENST00000435146 291 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AL078601.1-201ENST00000444542 271 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 RNA5SP233-201ENST00000459153 113 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 RPL31P41-201ENST00000477967 372 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 RNU6-889P-201ENST00000517189 103 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 ZNF705CP-201ENST00000530515 889 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA1O95477 AC008127.2-201ENST00000549925 1075 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AC012669.1-201ENST00000603209 283 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AL355877.2-201ENST00000603670 358 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 AL355297.2-201ENST00000604792 129 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 MTND2P41-201ENST00000637599 773 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ABCA1O95477 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
ABCA1O95477 RNU6-891P-201ENST00000384280 111 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 MIR649-201ENST00000384843 97 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 Z86062.1-201ENST00000406773 777 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 U6atac.2-201ENST00000408644 118 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.97□□□□□ -2.25
ABCA1O95477 CYCSP33-201ENST00000414485 327 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA1O95477 LINC01347-201ENST00000417964 355 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.97□□□□□ -2.25
ABCA1O95477 AC023790.1-201ENST00000482174 347 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 RPL30P5-201ENST00000494923 336 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 Y_RNA.681-201ENST00000516445 113 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA1O95477 AP004607.1-201ENST00000524456 203 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 DUXAP5-201ENST00000529668 529 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.97□□□□□ -2.25
ABCA1O95477 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ABCA1O95477 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA1O95477 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 HMGN2P15-201ENST00000585707 270 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 OR1M4P-201ENST00000589199 287 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 AC025588.2-201ENST00000604851 466 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA1O95477 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.97□□□□□ -2.25
ABCA1O95477 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ABCA1O95477 MTND5P30-201ENST00000452896 1731 ntBASIC0.97□□□□□ -2.25
ABCA1O95477 RNU4-91P-201ENST00000364778 135 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 RPS24P7-201ENST00000416921 246 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.96□□□□□ -2.26
ABCA1O95477 AIMP1P2-201ENST00000425294 312 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC093155.1-201ENST00000440164 826 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 FGF7P5-201ENST00000441829 291 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 MTCO3P2-201ENST00000457365 171 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AL121769.1-201ENST00000469473 401 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AC027575.1-201ENST00000481064 460 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA1O95477 AC112518.2-201ENST00000508565 425 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 RNU2-44P-201ENST00000516795 194 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC138473.1-201ENST00000605717 526 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AL161423.1-201ENST00000613700 262 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AC009090.3-201ENST00000616553 565 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 U6.107-201ENST00000637108 79 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA1O95477 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA1O95477 ZNF90P2-204ENST00000419323 1075 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC008850.1-201ENST00000427546 362 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.96□□□□□ -2.26
ABCA1O95477 AL691517.1-201ENST00000440833 1235 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 ANKRD26P4-201ENST00000455755 950 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA1O95477 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA1O95477 AC105245.1-201ENST00000581934 244 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms