Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
USH2AO75445 RNU1-96P-201ENST00000364163 162 ntBASIC0.27□□□□□ -2.37
USH2AO75445 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
USH2AO75445 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 Z80107.1-201ENST00000436830 412 ntBASIC0.27□□□□□ -2.37
USH2AO75445 CR769776.1-201ENST00000441254 787 ntBASIC0.27□□□□□ -2.37
USH2AO75445 SNORD57-201ENST00000448188 72 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC010099.1-201ENST00000455434 375 ntBASIC0.27□□□□□ -2.37
USH2AO75445 PMCHL2-203ENST00000457791 237 ntBASIC0.27□□□□□ -2.37
USH2AO75445 RN7SKP179-201ENST00000516126 217 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC093027.1-201ENST00000546698 429 ntBASIC0.27□□□□□ -2.37
USH2AO75445 CD24P2-201ENST00000565486 219 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC008749.1-201ENST00000597650 306 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC004832.4-201ENST00000608952 331 ntBASIC0.27□□□□□ -2.37
USH2AO75445 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.27□□□□□ -2.37
USH2AO75445 AC097372.5-201ENST00000623665 376 ntBASIC0.27□□□□□ -2.37
USH2AO75445 RNU6-146P-201ENST00000384602 108 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AP000567.1-201ENST00000406413 156 ntBASIC0.27□□□□□ -2.37
USH2AO75445 BTF3P11-201ENST00000426582 477 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC117454.1-201ENST00000491120 168 ntBASIC0.27□□□□□ -2.37
USH2AO75445 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 RNU6-928P-201ENST00000516876 104 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.27□□□□□ -2.37
USH2AO75445 AC240442.1-201ENST00000616055 283 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC087359.1-201ENST00000508335 1740 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AL136520.1-201ENST00000600311 1322 ntBASIC0.27□□□□□ -2.37
USH2AO75445 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.27□□□□□ -2.37
USH2AO75445 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.27□□□□□ -2.37
USH2AO75445 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.27□□□□□ -2.37
USH2AO75445 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
USH2AO75445 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
USH2AO75445 RNU6-889P-201ENST00000517189 103 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC026371.1-201ENST00000551867 419 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 MTCO2P22-201ENST00000603246 681 ntBASIC0.27□□□□□ -2.37
USH2AO75445 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.27□□□□□ -2.37
USH2AO75445 RNU6-939P-201ENST00000384634 107 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AC068050.1-201ENST00000394891 380 ntBASIC0.27□□□□□ -2.37
USH2AO75445 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.27□□□□□ -2.37
USH2AO75445 AC096745.1-201ENST00000509945 370 ntBASIC0.27□□□□□ -2.37
USH2AO75445 HMGB3P3-201ENST00000510526 400 ntBASIC0.27□□□□□ -2.37
USH2AO75445 AP001180.6-201ENST00000584918 159 ntBASIC0.27□□□□□ -2.37
USH2AO75445 RNA5SP189-201ENST00000364920 115 ntBASIC0.26□□□□□ -2.37
USH2AO75445 SNORD49B-201ENST00000365172 72 ntBASIC0.26□□□□□ -2.37
USH2AO75445 ANAPC10P1-201ENST00000395991 556 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RPL23AP95-201ENST00000426806 265 ntBASIC0.26□□□□□ -2.37
USH2AO75445 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 RPS27P21-201ENST00000486977 252 ntBASIC0.26□□□□□ -2.37
USH2AO75445 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.26□□□□□ -2.37
USH2AO75445 SUB1P1-201ENST00000524415 382 ntBASIC0.26□□□□□ -2.37
USH2AO75445 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
USH2AO75445 AP005639.2-201ENST00000527592 928 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC022662.1-201ENST00000580252 331 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AL161734.1-201ENST00000609720 557 ntBASIC0.26□□□□□ -2.37
USH2AO75445 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
USH2AO75445 Y_RNA.568-201ENST00000384742 113 ntBASIC0.26□□□□□ -2.37
USH2AO75445 OR9R1P-201ENST00000412200 877 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC106901.1-201ENST00000425086 698 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RPS29P28-201ENST00000446439 141 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AL500527.1-201ENST00000448532 255 ntBASIC0.26□□□□□ -2.37
USH2AO75445 PRELID3BP1-201ENST00000457142 540 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 NBEAP1-201ENST00000554452 979 ntBASIC0.26□□□□□ -2.37
USH2AO75445 MIR548AX-201ENST00000580117 73 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC007275.1-201ENST00000621243 671 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RLIMP2-201ENST00000427891 1563 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU1-58P-201ENST00000362413 163 ntBASIC0.26□□□□□ -2.37
USH2AO75445 SNORD3E-201ENST00000362899 217 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU4-52P-201ENST00000384209 138 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AL035666.1-201ENST00000446195 348 ntBASIC0.26□□□□□ -2.37
USH2AO75445 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 HMGN2P13-201ENST00000476476 274 ntBASIC0.26□□□□□ -2.37
USH2AO75445 PCNAP1-201ENST00000505363 709 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC109927.2-201ENST00000506416 303 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU4-57P-201ENST00000515980 135 ntBASIC0.26□□□□□ -2.37
USH2AO75445 CLIC4P2-201ENST00000601934 717 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC093788.1-201ENST00000609356 927 ntBASIC0.26□□□□□ -2.37
USH2AO75445 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU6-799P-201ENST00000363567 107 ntBASIC0.26□□□□□ -2.37
USH2AO75445 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
USH2AO75445 AC092447.6-201ENST00000414578 210 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.26□□□□□ -2.37
USH2AO75445 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.26□□□□□ -2.37
USH2AO75445 RAB9AP5-201ENST00000437794 597 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.26□□□□□ -2.37
USH2AO75445 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.26□□□□□ -2.37
USH2AO75445 AL135752.1-201ENST00000479477 471 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU6-287P-201ENST00000516230 98 ntBASIC0.26□□□□□ -2.37
USH2AO75445 CENPUP1-201ENST00000526649 1202 ntBASIC0.26□□□□□ -2.37
USH2AO75445 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.26□□□□□ -2.37
USH2AO75445 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
USH2AO75445 RNU6-45P-201ENST00000384471 107 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.25□□□□□ -2.37
USH2AO75445 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.25□□□□□ -2.37
USH2AO75445 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.25□□□□□ -2.37
USH2AO75445 RSU1P2-202ENST00000437884 485 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms