Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF40O75150 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF40O75150 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 LINC01963-201ENST00000562038 3148 ntBASIC5.69□□□□□ -1.5
RNF40O75150 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 RPL23P2-201ENST00000320371 421 ntBASIC5.69□□□□□ -1.5
RNF40O75150 RNA5SP443-201ENST00000363083 132 ntBASIC5.69□□□□□ -1.5
RNF40O75150 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF40O75150 MIR513C-201ENST00000401352 84 ntBASIC5.69□□□□□ -1.5
RNF40O75150 RNU6-1064P-201ENST00000410626 104 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF40O75150 AC005154.2-201ENST00000438110 379 ntBASIC5.69□□□□□ -1.5
RNF40O75150 Z82210.1-201ENST00000440037 231 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF40O75150 AC005042.3-201ENST00000453230 174 ntBASIC5.69□□□□□ -1.5
RNF40O75150 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 RNU7-197P-201ENST00000458836 62 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 AC004980.4-201ENST00000513375 203 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AC100767.1-201ENST00000528178 123 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 MIR4431-201ENST00000579990 94 ntBASIC5.69□□□□□ -1.5
RNF40O75150 RN7SL708P-201ENST00000580952 299 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 AC005176.2-201ENST00000596933 147 ntBASIC5.69□□□□□ -1.5
RNF40O75150 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AL645944.1-201ENST00000603857 493 ntBASIC5.69□□□□□ -1.5
RNF40O75150 AC126915.2-201ENST00000610957 190 ntBASIC5.69□□□□□ -1.5
RNF40O75150 Mico1.1-201ENST00000611698 204 ntBASIC5.69□□□□□ -1.5
RNF40O75150 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
RNF40O75150 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF40O75150 AC008079.2-201ENST00000623543 20396 ntBASIC5.69□□□□□ -1.5
RNF40O75150 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF40O75150 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF40O75150 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF40O75150 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF40O75150 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF40O75150 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF40O75150 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF40O75150 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RNF40O75150 RNA5SP335-201ENST00000363817 110 ntBASIC5.68□□□□□ -1.5
RNF40O75150 UBBP2-201ENST00000376781 231 ntBASIC5.68□□□□□ -1.5
RNF40O75150 MIR765-201ENST00000390226 114 ntBASIC5.68□□□□□ -1.5
RNF40O75150 SNORA40C-201ENST00000391285 128 ntBASIC5.68□□□□□ -1.5
RNF40O75150 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF40O75150 AL353705.4-201ENST00000449661 238 ntBASIC5.68□□□□□ -1.5
RNF40O75150 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.68□□□□□ -1.5
RNF40O75150 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.68□□□□□ -1.5
RNF40O75150 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF40O75150 Y_RNA.709-201ENST00000516952 92 ntBASIC5.68□□□□□ -1.5
RNF40O75150 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF40O75150 ZNF192P1-203ENST00000565888 810 ntBASIC5.68□□□□□ -1.5
RNF40O75150 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF40O75150 MIR3691-201ENST00000578066 90 ntBASIC5.68□□□□□ -1.5
RNF40O75150 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF40O75150 AC006254.2-201ENST00000603259 279 ntBASIC5.68□□□□□ -1.5
RNF40O75150 uc_338.7-201ENST00000621834 124 ntBASIC5.68□□□□□ -1.5
RNF40O75150 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
RNF40O75150 AP000756.2-201ENST00000624168 2567 ntBASIC5.68□□□□□ -1.5
RNF40O75150 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF40O75150 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF40O75150 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF40O75150 MUC2-202ENST00000613187 4845 ntBASIC5.68□□□□□ -1.5
RNF40O75150 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF40O75150 AC092593.1-201ENST00000515413 1815 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AC009812.4-201ENST00000569134 1805 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AL450345.1-202ENST00000605741 3881 ntBASIC5.67□□□□□ -1.5
RNF40O75150 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.67□□□□□ -1.5
RNF40O75150 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 Y_RNA.309-201ENST00000365046 111 ntBASIC5.67□□□□□ -1.5
RNF40O75150 MIR551A-201ENST00000385042 96 ntBASIC5.67□□□□□ -1.5
RNF40O75150 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RNF40O75150 RNU6-381P-201ENST00000391259 108 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AL133270.1-201ENST00000402635 279 ntBASIC5.67□□□□□ -1.5
RNF40O75150 RN7SKP216-201ENST00000411050 312 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF40O75150 AL590762.4-201ENST00000425885 253 ntBASIC5.67□□□□□ -1.5
RNF40O75150 BTF3P11-201ENST00000426582 477 ntBASIC5.67□□□□□ -1.5
RNF40O75150 RPS15AP5-201ENST00000436276 388 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF40O75150 RNA5SP103-201ENST00000459503 118 ntBASIC5.67□□□□□ -1.5
RNF40O75150 RN7SL447P-201ENST00000494711 245 ntBASIC5.67□□□□□ -1.5
RNF40O75150 SNRPCP2-201ENST00000504370 475 ntBASIC5.67□□□□□ -1.5
RNF40O75150 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF40O75150 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF40O75150 AC006349.1-201ENST00000555526 235 ntBASIC5.67□□□□□ -1.5
RNF40O75150 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF40O75150 MIR6748-201ENST00000610433 71 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms