Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.13□□□□□ -2.07
BRD4O60885 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.13□□□□□ -2.07
BRD4O60885 AL020997.3-201ENST00000602843 359 ntBASIC2.13□□□□□ -2.07
BRD4O60885 AP002906.1-201ENST00000603405 233 ntBASIC2.13□□□□□ -2.07
BRD4O60885 SEPT7P9-203ENST00000604116 343 ntBASIC2.13□□□□□ -2.07
BRD4O60885 AC084824.5-201ENST00000612009 413 ntBASIC2.13□□□□□ -2.07
BRD4O60885 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRD4O60885 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.13□□□□□ -2.07
BRD4O60885 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
BRD4O60885 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
BRD4O60885 SGO1P1-201ENST00000603525 1447 ntBASIC2.12□□□□□ -2.07
BRD4O60885 RNU1-42P-201ENST00000364033 160 ntBASIC2.12□□□□□ -2.07
BRD4O60885 U8.14-201ENST00000390843 143 ntBASIC2.12□□□□□ -2.07
BRD4O60885 SNORA67.6-201ENST00000391093 99 ntBASIC2.12□□□□□ -2.07
BRD4O60885 TMSB4XP8-201ENST00000402089 135 ntBASIC2.12□□□□□ -2.07
BRD4O60885 TMSB4XP6-201ENST00000415187 135 ntBASIC2.12□□□□□ -2.07
BRD4O60885 BEND7P1-201ENST00000422058 457 ntBASIC2.12□□□□□ -2.07
BRD4O60885 TMSB4XP1-201ENST00000424567 135 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.12□□□□□ -2.07
BRD4O60885 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.12□□□□□ -2.07
BRD4O60885 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.12□□□□□ -2.07
BRD4O60885 SUMO2P6-201ENST00000505273 288 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.12□□□□□ -2.07
BRD4O60885 AC092436.3-201ENST00000511788 257 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC091965.2-201ENST00000512324 613 ntBASIC2.12□□□□□ -2.07
BRD4O60885 SNORA31.24-201ENST00000517232 57 ntBASIC2.12□□□□□ -2.07
BRD4O60885 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
BRD4O60885 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
BRD4O60885 AC010186.2-204ENST00000537668 439 ntBASIC2.12□□□□□ -2.07
BRD4O60885 SETP7-201ENST00000552169 453 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AL161670.1-201ENST00000554348 137 ntBASIC2.12□□□□□ -2.07
BRD4O60885 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.12□□□□□ -2.07
BRD4O60885 NIFKP8-201ENST00000560500 874 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC087465.1-201ENST00000560574 245 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AL031176.1-201ENST00000604554 466 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AP005229.2-201ENST00000609980 697 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC090132.2-201ENST00000615881 347 ntBASIC2.12□□□□□ -2.07
BRD4O60885 AC116618.1-201ENST00000634617 774 ntBASIC2.12□□□□□ -2.07
BRD4O60885 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.12□□□□□ -2.07
BRD4O60885 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.12□□□□□ -2.07
BRD4O60885 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.12□□□□□ -2.07
BRD4O60885 RNU6-932P-201ENST00000391108 106 ntBASIC2.11□□□□□ -2.07
BRD4O60885 USP9YP19-201ENST00000412165 485 ntBASIC2.11□□□□□ -2.07
BRD4O60885 ZNF90P2-204ENST00000419323 1075 ntBASIC2.11□□□□□ -2.07
BRD4O60885 NDUFB4P7-201ENST00000423198 363 ntBASIC2.11□□□□□ -2.07
BRD4O60885 MTCO2P1-201ENST00000424648 477 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AL158053.1-201ENST00000441503 453 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.11□□□□□ -2.07
BRD4O60885 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.11□□□□□ -2.07
BRD4O60885 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BRD4O60885 HMGB3P17-201ENST00000504195 649 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.11□□□□□ -2.07
BRD4O60885 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.11□□□□□ -2.07
BRD4O60885 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.11□□□□□ -2.07
BRD4O60885 MIR4789-201ENST00000577469 82 ntBASIC2.11□□□□□ -2.07
BRD4O60885 MIR4421-201ENST00000578133 69 ntBASIC2.11□□□□□ -2.07
BRD4O60885 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BRD4O60885 AC005776.1-201ENST00000603164 290 ntBASIC2.11□□□□□ -2.07
BRD4O60885 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.11□□□□□ -2.07
BRD4O60885 MIR3199-2-201ENST00000636243 86 ntBASIC2.11□□□□□ -2.07
BRD4O60885 OR4G11P-202ENST00000642116 1414 ntBASIC2.11□□□□□ -2.07
BRD4O60885 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
BRD4O60885 SNORA7.1-201ENST00000363750 139 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-234P-201ENST00000365229 104 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR135A2-201ENST00000384854 100 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR325-201ENST00000385260 98 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR147B-201ENST00000390185 80 ntBASIC2.1□□□□□ -2.07
BRD4O60885 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
BRD4O60885 MIR1323-201ENST00000408090 73 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU2-43P-201ENST00000410306 190 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-174P-201ENST00000410406 106 ntBASIC2.1□□□□□ -2.07
BRD4O60885 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.1□□□□□ -2.07
BRD4O60885 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AL512637.2-201ENST00000431287 1256 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC234064.1-201ENST00000436312 247 ntBASIC2.1□□□□□ -2.07
BRD4O60885 SDCBPP1-201ENST00000440192 890 ntBASIC2.1□□□□□ -2.07
BRD4O60885 BMI1P1-201ENST00000445879 941 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.1□□□□□ -2.07
BRD4O60885 AC118282.2-201ENST00000508739 374 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 CR383656.7-201ENST00000548164 174 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.1□□□□□ -2.07
BRD4O60885 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AC006213.4-201ENST00000616184 634 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC078880.5-201ENST00000617845 421 ntBASIC2.1□□□□□ -2.07
BRD4O60885 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-115P-201ENST00000364310 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-354P-201ENST00000383862 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-1-201ENST00000383898 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-42P-201ENST00000384165 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-36P-201ENST00000384172 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-4P-201ENST00000384205 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-5P-201ENST00000384238 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-610P-201ENST00000384264 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms