Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 USP9YP8-201ENST00000441913 500 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.03□□□□□ -1.92
CACNA1FO60840 NFU1P2-201ENST00000448700 469 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC008628.2-201ENST00000502605 298 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 RNU6-507P-201ENST00000516045 100 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 RNU2-58P-201ENST00000516403 183 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AP003122.4-201ENST00000530980 758 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 GLYCAM1-201ENST00000546596 285 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL157394.1-201ENST00000562983 1224 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 MIR3167-201ENST00000579623 85 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 MIR4307-201ENST00000582802 84 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL162413.1-201ENST00000603198 110 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC048347.1-201ENST00000624621 427 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 MIR3662-201ENST00000637030 95 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC099654.14-201ENST00000638599 341 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CACNA1FO60840 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CACNA1FO60840 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.92
CACNA1FO60840 RNY4P14-201ENST00000363656 96 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 SNORA7.2-201ENST00000364446 145 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 Y_RNA.372-201ENST00000365599 102 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 DEFA7P-201ENST00000382676 285 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 SNORA36C-201ENST00000384289 132 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 MIR1250-201ENST00000408098 113 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 RNU2-21P-201ENST00000410368 188 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL359704.1-201ENST00000411586 781 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 ELOCP14-201ENST00000428070 331 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC002486.1-201ENST00000435098 391 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 ELOCP7-201ENST00000439968 331 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 SNRPEP8-201ENST00000442866 260 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 RPL17P49-201ENST00000443728 411 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 DPPA3P1-201ENST00000448050 469 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 TMEM248P1-201ENST00000510579 951 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 RN7SKP24-201ENST00000515888 284 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AC123904.3-201ENST00000547218 814 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1FO60840 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.03□□□□□ -1.92
CACNA1FO60840 AL117336.2-201ENST00000602435 335 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC011451.2-201ENST00000604303 598 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC006023.2-201ENST00000609916 167 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC064859.1-201ENST00000624741 174 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AC091152.2-201ENST00000591628 2569 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 AL022578.1-201ENST00000439330 1433 ntBASIC3.03□□□□□ -1.92
CACNA1FO60840 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CACNA1FO60840 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.02□□□□□ -1.93
CACNA1FO60840 Y_RNA.38-201ENST00000362617 102 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RNY3P3-201ENST00000363816 102 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RNU6-877P-201ENST00000383868 107 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RPS3AP36-201ENST00000398190 775 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RN7SKP266-201ENST00000410232 287 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.02□□□□□ -1.93
CACNA1FO60840 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.02□□□□□ -1.93
CACNA1FO60840 SDCBPP1-201ENST00000440192 890 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RPL32P28-201ENST00000443577 397 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.02□□□□□ -1.93
CACNA1FO60840 AC132479.1-201ENST00000449160 144 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.02□□□□□ -1.93
CACNA1FO60840 USP9YP12-201ENST00000450481 570 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA1FO60840 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.02□□□□□ -1.93
CACNA1FO60840 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.02□□□□□ -1.93
CACNA1FO60840 AP000705.1-201ENST00000454567 350 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 snoU13.7-201ENST00000459220 104 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AC079382.1-201ENST00000493346 557 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.02□□□□□ -1.93
CACNA1FO60840 AC109635.3-201ENST00000529536 185 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AK6P1-201ENST00000540219 478 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 ADI1P3-201ENST00000549509 470 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AC080013.4-201ENST00000607624 649 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 OR10AB1P-201ENST00000609613 938 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA1FO60840 AC104260.1-201ENST00000616660 539 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.02□□□□□ -1.93
CACNA1FO60840 CYP3A51P-201ENST00000633513 256 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 AP001486.2-201ENST00000561652 5113 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA1FO60840 PABPC1P7-201ENST00000413177 1513 ntBASIC3.02□□□□□ -1.93
CACNA1FO60840 MT-TL1-201ENST00000386347 75 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 C1DP2-201ENST00000418167 426 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AL353777.1-201ENST00000425552 326 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms