Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 AC068790.2-201ENST00000602601 557 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC174048.1-201ENST00000603389 144 ntBASIC2.8□□□□□ -1.96
SNX3O60493 BNIP3P9-201ENST00000603714 553 ntBASIC2.8□□□□□ -1.96
SNX3O60493 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
SNX3O60493 Z99129.1-201ENST00000612510 255 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AL355365.1-201ENST00000616480 294 ntBASIC2.8□□□□□ -1.96
SNX3O60493 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNX3O60493 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX3O60493 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX3O60493 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX3O60493 RNU4-75P-201ENST00000364621 146 ntBASIC2.79□□□□□ -1.96
SNX3O60493 RNU6-108P-201ENST00000365558 107 ntBASIC2.79□□□□□ -1.96
SNX3O60493 Y_RNA.534-201ENST00000384599 112 ntBASIC2.79□□□□□ -1.96
SNX3O60493 MIR1-2-201ENST00000384961 85 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
SNX3O60493 RN7SKP202-201ENST00000410439 330 ntBASIC2.79□□□□□ -1.96
SNX3O60493 RNU2-68P-201ENST00000410878 191 ntBASIC2.79□□□□□ -1.96
SNX3O60493 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX3O60493 AL109913.1-201ENST00000421173 514 ntBASIC2.79□□□□□ -1.96
SNX3O60493 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX3O60493 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX3O60493 MTCO2P11-201ENST00000431069 680 ntBASIC2.79□□□□□ -1.96
SNX3O60493 CYCSP32-201ENST00000440548 321 ntBASIC2.79□□□□□ -1.96
SNX3O60493 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.79□□□□□ -1.96
SNX3O60493 AC079781.2-201ENST00000446424 169 ntBASIC2.79□□□□□ -1.96
SNX3O60493 RPL37P4-201ENST00000448908 268 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX3O60493 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNX3O60493 AC126389.1-201ENST00000477436 290 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AC139453.3-201ENST00000493276 369 ntBASIC2.79□□□□□ -1.96
SNX3O60493 SUMO2P6-201ENST00000505273 288 ntBASIC2.79□□□□□ -1.96
SNX3O60493 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX3O60493 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.79□□□□□ -1.96
SNX3O60493 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX3O60493 AP001646.1-201ENST00000527936 915 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX3O60493 AC106785.1-201ENST00000565935 262 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX3O60493 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX3O60493 AC091805.2-201ENST00000603848 235 ntBASIC2.79□□□□□ -1.96
SNX3O60493 Z84480.1-201ENST00000605131 311 ntBASIC2.79□□□□□ -1.96
SNX3O60493 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNX3O60493 AC093648.1-201ENST00000623546 606 ntBASIC2.79□□□□□ -1.96
SNX3O60493 AP003122.6-201ENST00000623831 495 ntBASIC2.79□□□□□ -1.96
SNX3O60493 Z99571.1-201ENST00000636677 394 ntBASIC2.79□□□□□ -1.96
SNX3O60493 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.79□□□□□ -1.96
SNX3O60493 AC009487.2-201ENST00000420969 6821 ntBASIC2.79□□□□□ -1.96
SNX3O60493 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX3O60493 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
SNX3O60493 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX3O60493 AL359693.1-201ENST00000614959 2407 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNX3O60493 RNA5SP124-201ENST00000362739 110 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RNU6-799P-201ENST00000363567 107 ntBASIC2.78□□□□□ -1.96
SNX3O60493 Y_RNA.367-201ENST00000365544 101 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RNU6-74P-201ENST00000384235 107 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RNU6-456P-201ENST00000384493 107 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MIR888-201ENST00000401186 77 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RNU2-66P-201ENST00000410650 161 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RAB9AP3-201ENST00000412737 573 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.78□□□□□ -1.96
SNX3O60493 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX3O60493 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.78□□□□□ -1.96
SNX3O60493 AL353678.1-201ENST00000422735 741 ntBASIC2.78□□□□□ -1.96
SNX3O60493 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX3O60493 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNX3O60493 AC005019.1-201ENST00000436455 431 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AL513043.1-201ENST00000439124 535 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.78□□□□□ -1.96
SNX3O60493 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX3O60493 AC132479.1-201ENST00000449160 144 ntBASIC2.78□□□□□ -1.96
SNX3O60493 RAB9AP1-201ENST00000449393 573 ntBASIC2.78□□□□□ -1.96
SNX3O60493 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SNX3O60493 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX3O60493 AC087190.1-201ENST00000484462 480 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC116562.3-201ENST00000506136 177 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX3O60493 RNU6-914P-201ENST00000516749 109 ntBASIC2.78□□□□□ -1.96
SNX3O60493 SNORA31.21-201ENST00000517180 77 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MTCYBP20-201ENST00000524239 1129 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC068587.5-201ENST00000528506 175 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX3O60493 HPRT1P3-201ENST00000539521 576 ntBASIC2.78□□□□□ -1.96
SNX3O60493 DNAJC8P1-201ENST00000554535 372 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC009063.1-201ENST00000563342 702 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MIR3922-201ENST00000585192 84 ntBASIC2.78□□□□□ -1.96
SNX3O60493 HMGN2P15-201ENST00000585707 270 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AL133393.1-201ENST00000603277 287 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC064807.4-201ENST00000607201 407 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MIR15A-201ENST00000607334 83 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AC136475.10-201ENST00000620253 385 ntBASIC2.78□□□□□ -1.96
SNX3O60493 MIR3651-201ENST00000630427 90 ntBASIC2.78□□□□□ -1.96
SNX3O60493 AL512643.1-201ENST00000635735 524 ntBASIC2.78□□□□□ -1.96
SNX3O60493 U2.21-201ENST00000637295 81 ntBASIC2.78□□□□□ -1.96
SNX3O60493 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNX3O60493 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SNX3O60493 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms