Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SSNA1O43805 RSU1P2-202ENST00000437884 485 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
SSNA1O43805 H2AFZP6-201ENST00000444403 394 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.52□□□□□ -2.17
SSNA1O43805 HIGD1AP2-201ENST00000446367 280 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 MTND1P31-201ENST00000449206 961 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.52□□□□□ -2.17
SSNA1O43805 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.52□□□□□ -2.17
SSNA1O43805 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.52□□□□□ -2.17
SSNA1O43805 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SSNA1O43805 AC139453.3-201ENST00000493276 369 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.52□□□□□ -2.17
SSNA1O43805 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SSNA1O43805 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.52□□□□□ -2.17
SSNA1O43805 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
SSNA1O43805 AC110760.3-202ENST00000515177 371 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 SNORA67.7-201ENST00000516664 135 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 SNORA48.11-201ENST00000517015 89 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 MRPS36P5-201ENST00000551909 298 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.52□□□□□ -2.17
SSNA1O43805 MIR4697-201ENST00000582977 78 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
SSNA1O43805 AC109454.4-201ENST00000623411 649 ntBASIC1.52□□□□□ -2.17
SSNA1O43805 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SSNA1O43805 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSNA1O43805 NACAP2-201ENST00000318548 624 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AC062016.1-201ENST00000355719 319 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RNU6-223P-201ENST00000362830 107 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RNU1-23P-201ENST00000363361 144 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AL603865.2-201ENST00000401679 213 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RNA5SP184-201ENST00000411071 108 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RPS3AP25-201ENST00000411660 793 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.51□□□□□ -2.17
SSNA1O43805 USP9YP26-201ENST00000421008 661 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RPL17P35-201ENST00000432217 549 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 RPL7P34-201ENST00000433316 712 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AL353706.1-201ENST00000436728 494 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AC107083.1-201ENST00000439643 279 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 MTND5P14-201ENST00000441481 1267 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.51□□□□□ -2.17
SSNA1O43805 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.51□□□□□ -2.17
SSNA1O43805 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.51□□□□□ -2.17
SSNA1O43805 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SSNA1O43805 DUXAP5-201ENST00000529668 529 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
SSNA1O43805 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.51□□□□□ -2.17
SSNA1O43805 MIR4443-201ENST00000585052 53 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AC091057.3-201ENST00000602684 733 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SSNA1O43805 AC093875.1-201ENST00000623688 504 ntBASIC1.51□□□□□ -2.17
SSNA1O43805 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.51□□□□□ -2.17
SSNA1O43805 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSNA1O43805 AC019129.1-201ENST00000403786 261 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.5□□□□□ -2.17
SSNA1O43805 AL353621.1-201ENST00000418219 243 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 UBE2D3P3-201ENST00000426992 425 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC244035.1-201ENST00000430042 390 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 AC087884.1-201ENST00000469738 328 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC117503.1-201ENST00000472241 394 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC010631.1-201ENST00000474150 156 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.5□□□□□ -2.17
SSNA1O43805 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SSNA1O43805 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SSNA1O43805 AC104417.1-201ENST00000523974 751 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC023538.1-201ENST00000534576 736 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 AC079598.5-201ENST00000547460 117 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 BNIP3P25-201ENST00000596023 559 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.5□□□□□ -2.17
SSNA1O43805 AC069545.1-201ENST00000605671 358 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.5□□□□□ -2.17
SSNA1O43805 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AL442067.2-201ENST00000614033 363 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AC025034.2-201ENST00000623264 286 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 AL356094.1-201ENST00000624663 1212 ntBASIC1.5□□□□□ -2.17
SSNA1O43805 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
SSNA1O43805 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.5□□□□□ -2.17
SSNA1O43805 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SSNA1O43805 MTND5P6-201ENST00000422338 1798 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SSNA1O43805 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.49□□□□□ -2.17
SSNA1O43805 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSNA1O43805 RNU6-512P-201ENST00000364438 103 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 MIR561-201ENST00000385216 97 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 RPL7P27-201ENST00000403775 720 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AL133475.1-201ENST00000404414 305 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AL021407.1-201ENST00000404531 386 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 USP9YP6-201ENST00000413550 854 ntBASIC1.49□□□□□ -2.17
SSNA1O43805 AC009963.1-201ENST00000417265 157 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms