Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR6076-201ENST00000617521 113 ntBASIC3.68□□□□□ -1.82
PHGDHO43175 AC099506.2-201ENST00000623074 221 ntBASIC3.68□□□□□ -1.82
PHGDHO43175 AC022418.1-201ENST00000624118 445 ntBASIC3.68□□□□□ -1.82
PHGDHO43175 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHGDHO43175 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHGDHO43175 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
PHGDHO43175 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHGDHO43175 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PHGDHO43175 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 MTND4P12-201ENST00000498999 1377 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 AC022336.2-201ENST00000568966 2538 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 RNU6-1179P-201ENST00000384667 107 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PHGDHO43175 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.67□□□□□ -1.82
PHGDHO43175 AC002075.2-201ENST00000425207 252 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.67□□□□□ -1.82
PHGDHO43175 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.67□□□□□ -1.82
PHGDHO43175 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.67□□□□□ -1.82
PHGDHO43175 USP9YP8-201ENST00000441913 500 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC022493.1-201ENST00000492984 337 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC139453.3-201ENST00000493276 369 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 HMGN1P12-201ENST00000499125 195 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 TBCAP3-201ENST00000512475 312 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC008549.1-201ENST00000512900 643 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 RNA5SP164-201ENST00000516533 110 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.67□□□□□ -1.82
PHGDHO43175 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
PHGDHO43175 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.67□□□□□ -1.82
PHGDHO43175 AC243972.3-201ENST00000539655 198 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.67□□□□□ -1.82
PHGDHO43175 PSMA3P-201ENST00000555485 635 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.67□□□□□ -1.82
PHGDHO43175 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.67□□□□□ -1.82
PHGDHO43175 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.67□□□□□ -1.82
PHGDHO43175 UBE2V2P2-201ENST00000587677 504 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC073539.2-201ENST00000597113 165 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 FTX_3.1-201ENST00000610451 147 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AL391261.4-201ENST00000616012 481 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC104260.1-201ENST00000616660 539 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 AC009248.2-201ENST00000619826 254 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
PHGDHO43175 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.67□□□□□ -1.82
PHGDHO43175 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.67□□□□□ -1.82
PHGDHO43175 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PHGDHO43175 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 CEP170P1-201ENST00000502249 4587 ntBASIC3.67□□□□□ -1.82
PHGDHO43175 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHGDHO43175 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 Y_RNA.530-201ENST00000384587 101 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PHGDHO43175 RNU6-1148P-201ENST00000410992 104 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AL645937.1-202ENST00000421799 937 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 RPL35AP12-201ENST00000425362 338 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.66□□□□□ -1.82
PHGDHO43175 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AL590664.1-201ENST00000448065 339 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 MTND3P25-201ENST00000509243 135 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC008716.1-201ENST00000511084 513 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC114781.4-201ENST00000513707 639 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 RNU6-928P-201ENST00000516876 104 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC025755.1-201ENST00000521306 278 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC107953.1-201ENST00000522216 297 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.66□□□□□ -1.82
PHGDHO43175 AC011602.1-201ENST00000546484 331 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC090115.3-201ENST00000553218 849 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 MTCO3P23-201ENST00000561363 289 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC007224.1-201ENST00000564410 144 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.66□□□□□ -1.82
PHGDHO43175 BNIP3P25-201ENST00000596023 559 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AL731566.2-201ENST00000618971 317 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC103705.1-201ENST00000619013 241 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 AC118273.1-201ENST00000525324 3006 ntBASIC3.66□□□□□ -1.82
PHGDHO43175 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PHGDHO43175 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.66□□□□□ -1.82
PHGDHO43175 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PHGDHO43175 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PHGDHO43175 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PHGDHO43175 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.65□□□□□ -1.82
PHGDHO43175 Y_RNA.167-201ENST00000363735 109 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.65□□□□□ -1.83
PHGDHO43175 SNORA75B-201ENST00000384053 137 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 RNU6-1035P-201ENST00000384477 107 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC004975.1-201ENST00000428733 208 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC073063.1-201ENST00000434352 607 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms