Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
UBFD1O14562 DDX10P1-201ENST00000448545 1933 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
UBFD1O14562 MIR337-201ENST00000362281 93 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 SNORA23-201ENST00000365128 182 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBFD1O14562 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
UBFD1O14562 RNU6-920P-201ENST00000410926 92 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.64□□□□□ -2.15
UBFD1O14562 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.64□□□□□ -2.15
UBFD1O14562 RPS15AP5-201ENST00000436276 388 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 RPL35AP22-201ENST00000436855 335 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 MTND2P20-201ENST00000440805 661 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.64□□□□□ -2.15
UBFD1O14562 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.64□□□□□ -2.15
UBFD1O14562 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.64□□□□□ -2.15
UBFD1O14562 RNU7-136P-201ENST00000458819 69 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 RPS20P20-201ENST00000460498 340 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.64□□□□□ -2.15
UBFD1O14562 AC079203.1-201ENST00000487972 404 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 AC098591.2-201ENST00000510152 315 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.64□□□□□ -2.15
UBFD1O14562 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.64□□□□□ -2.15
UBFD1O14562 HIGD1AP17-201ENST00000554576 276 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 MIR4498-201ENST00000577599 66 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.64□□□□□ -2.15
UBFD1O14562 AL161729.4-201ENST00000604650 476 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
UBFD1O14562 AC008498.1-201ENST00000613012 531 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 AC108479.2-201ENST00000617314 601 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.64□□□□□ -2.15
UBFD1O14562 AL356473.1-201ENST00000406203 1408 ntBASIC1.64□□□□□ -2.15
UBFD1O14562 AC005539.1-201ENST00000443768 1479 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBFD1O14562 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.63□□□□□ -2.15
UBFD1O14562 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBFD1O14562 RNU6-741P-201ENST00000383889 107 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 SEPT2P1-201ENST00000419651 180 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 ZNF863P-201ENST00000426746 417 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.63□□□□□ -2.15
UBFD1O14562 PTGES3P1-201ENST00000439531 483 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC002381.1-201ENST00000447049 280 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC114981.1-201ENST00000503897 678 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 MTCYBP16-201ENST00000509187 1129 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.63□□□□□ -2.15
UBFD1O14562 RNU6-583P-201ENST00000516012 92 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 SNORA31.6-201ENST00000516241 130 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 RNU6-1225P-201ENST00000516336 65 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.63□□□□□ -2.15
UBFD1O14562 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 AP003497.1-201ENST00000528472 562 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 SLC2A13P1-201ENST00000531560 322 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.63□□□□□ -2.15
UBFD1O14562 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.63□□□□□ -2.15
UBFD1O14562 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 BNIP3P8-201ENST00000597863 560 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AP000403.1-201ENST00000603349 851 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC025594.3-201ENST00000613068 790 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AC091834.1-201ENST00000614543 472 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 AL356094.1-201ENST00000624663 1212 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBFD1O14562 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
UBFD1O14562 CDR1-202ENST00000625883 1485 ntBASIC1.63□□□□□ -2.15
UBFD1O14562 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
UBFD1O14562 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBFD1O14562 MIR378A-201ENST00000362177 66 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 RNU6-236P-201ENST00000363886 106 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
UBFD1O14562 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 CIR1P3-201ENST00000405137 479 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 RNU2-33P-201ENST00000410344 192 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AC108667.1-201ENST00000428618 249 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UBFD1O14562 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 RPL18AP17-201ENST00000455326 198 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 RNU5F-8P-201ENST00000515941 111 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 RNY4P37-201ENST00000516225 96 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 SCARNA11.3-201ENST00000517276 130 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBFD1O14562 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.62□□□□□ -2.15
UBFD1O14562 DEFB130C-202ENST00000530001 230 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 GNAI2P1-201ENST00000541815 315 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.62□□□□□ -2.15
UBFD1O14562 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.62□□□□□ -2.15
UBFD1O14562 AL627230.6-201ENST00000611129 280 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AC024257.5-201ENST00000612739 531 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms