Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CUX2O14529 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.03□□□□□ -1.92
CUX2O14529 CCDC58P2-201ENST00000417131 366 ntBASIC3.03□□□□□ -1.92
CUX2O14529 SSXP9-201ENST00000417503 292 ntBASIC3.03□□□□□ -1.92
CUX2O14529 MTATP6P4-201ENST00000427725 675 ntBASIC3.03□□□□□ -1.92
CUX2O14529 USP9YP24-201ENST00000434374 697 ntBASIC3.03□□□□□ -1.92
CUX2O14529 USP9YP17-201ENST00000444617 696 ntBASIC3.03□□□□□ -1.92
CUX2O14529 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.03□□□□□ -1.92
CUX2O14529 AL021397.1-201ENST00000451806 248 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.03□□□□□ -1.92
CUX2O14529 AC025033.1-201ENST00000463883 194 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC104472.2-201ENST00000469035 601 ntBASIC3.03□□□□□ -1.92
CUX2O14529 ARL4AP2-201ENST00000507378 601 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC119751.4-201ENST00000507498 357 ntBASIC3.03□□□□□ -1.92
CUX2O14529 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.03□□□□□ -1.92
CUX2O14529 SNORA70.16-201ENST00000516390 95 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.03□□□□□ -1.92
CUX2O14529 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.03□□□□□ -1.92
CUX2O14529 DEFB131D-201ENST00000526803 184 ntBASIC3.03□□□□□ -1.92
CUX2O14529 RPS3AP23-202ENST00000574601 686 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC006270.3-201ENST00000605967 1036 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AL357080.1-201ENST00000617394 239 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AL596245.1-201ENST00000618994 362 ntBASIC3.03□□□□□ -1.92
CUX2O14529 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.03□□□□□ -1.92
CUX2O14529 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CUX2O14529 AL022578.1-201ENST00000439330 1433 ntBASIC3.03□□□□□ -1.92
CUX2O14529 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.03□□□□□ -1.92
CUX2O14529 SNORD116.1-201ENST00000365628 92 ntBASIC3.03□□□□□ -1.93
CUX2O14529 MIR493-201ENST00000385254 89 ntBASIC3.03□□□□□ -1.93
CUX2O14529 RNU4-22P-201ENST00000411058 166 ntBASIC3.03□□□□□ -1.93
CUX2O14529 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.03□□□□□ -1.93
CUX2O14529 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.03□□□□□ -1.93
CUX2O14529 RNU7-136P-201ENST00000458819 69 ntBASIC3.03□□□□□ -1.93
CUX2O14529 AC109486.1-201ENST00000486833 374 ntBASIC3.03□□□□□ -1.93
CUX2O14529 AC022634.1-201ENST00000520765 532 ntBASIC3.03□□□□□ -1.93
CUX2O14529 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.03□□□□□ -1.93
CUX2O14529 AP001269.3-201ENST00000588718 329 ntBASIC3.03□□□□□ -1.93
CUX2O14529 MTCO2P2-201ENST00000591258 225 ntBASIC3.03□□□□□ -1.93
CUX2O14529 AC091057.3-201ENST00000602684 733 ntBASIC3.03□□□□□ -1.93
CUX2O14529 BBIP1P1-201ENST00000602999 279 ntBASIC3.03□□□□□ -1.93
CUX2O14529 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CUX2O14529 AC116618.1-201ENST00000634617 774 ntBASIC3.03□□□□□ -1.93
CUX2O14529 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CUX2O14529 AC005832.2-201ENST00000538921 1430 ntBASIC3.02□□□□□ -1.93
CUX2O14529 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CUX2O14529 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
CUX2O14529 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CUX2O14529 RNU6-1077P-201ENST00000410506 102 ntBASIC3.02□□□□□ -1.93
CUX2O14529 USP9YP33-201ENST00000412220 421 ntBASIC3.02□□□□□ -1.93
CUX2O14529 RPL23AP39-201ENST00000415533 405 ntBASIC3.02□□□□□ -1.93
CUX2O14529 USP9YP35-201ENST00000435696 412 ntBASIC3.02□□□□□ -1.93
CUX2O14529 THAP5P1-201ENST00000439089 262 ntBASIC3.02□□□□□ -1.93
CUX2O14529 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 AC108729.1-201ENST00000487812 947 ntBASIC3.02□□□□□ -1.93
CUX2O14529 SNORD59.2-201ENST00000516873 68 ntBASIC3.02□□□□□ -1.93
CUX2O14529 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
CUX2O14529 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.02□□□□□ -1.93
CUX2O14529 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.02□□□□□ -1.93
CUX2O14529 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
CUX2O14529 AC131235.4-201ENST00000609288 620 ntBASIC3.02□□□□□ -1.93
CUX2O14529 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.02□□□□□ -1.93
CUX2O14529 VTRNA1-1-201ENST00000363120 99 ntBASIC3.01□□□□□ -1.93
CUX2O14529 RPL30P14-201ENST00000482744 348 ntBASIC3.01□□□□□ -1.93
CUX2O14529 AC134050.1-201ENST00000495088 933 ntBASIC3.01□□□□□ -1.93
CUX2O14529 AC006499.2-201ENST00000513470 337 ntBASIC3.01□□□□□ -1.93
CUX2O14529 AC022483.1-201ENST00000514020 567 ntBASIC3.01□□□□□ -1.93
CUX2O14529 RNY4P37-201ENST00000516225 96 ntBASIC3.01□□□□□ -1.93
CUX2O14529 RNU6-150P-201ENST00000516237 95 ntBASIC3.01□□□□□ -1.93
CUX2O14529 RNA5SP476-201ENST00000516613 103 ntBASIC3.01□□□□□ -1.93
CUX2O14529 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.01□□□□□ -1.93
CUX2O14529 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CUX2O14529 MIR3921-201ENST00000577308 85 ntBASIC3.01□□□□□ -1.93
CUX2O14529 AC009812.4-201ENST00000569134 1805 ntBASIC3□□□□□ -1.93
CUX2O14529 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CUX2O14529 RNU2-32P-201ENST00000411193 191 ntBASIC3□□□□□ -1.93
CUX2O14529 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3□□□□□ -1.93
CUX2O14529 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3□□□□□ -1.93
CUX2O14529 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3□□□□□ -1.93
CUX2O14529 AC104308.1-201ENST00000454621 333 ntBASIC3□□□□□ -1.93
CUX2O14529 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3□□□□□ -1.93
CUX2O14529 RN7SKP49-201ENST00000516675 260 ntBASIC3□□□□□ -1.93
CUX2O14529 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3□□□□□ -1.93
CUX2O14529 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CUX2O14529 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3□□□□□ -1.93
CUX2O14529 AP001429.1-201ENST00000602568 530 ntBASIC3□□□□□ -1.93
CUX2O14529 AL158211.4-201ENST00000606988 584 ntBASIC3□□□□□ -1.93
CUX2O14529 RNU4-5P-201ENST00000607255 135 ntBASIC3□□□□□ -1.93
CUX2O14529 AL136370.1-201ENST00000608166 691 ntBASIC3□□□□□ -1.93
CUX2O14529 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
CUX2O14529 AC099786.3-201ENST00000565735 1410 ntBASIC2.99□□□□□ -1.93
CUX2O14529 MIRLET7G-201ENST00000362280 84 ntBASIC2.99□□□□□ -1.93
CUX2O14529 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CUX2O14529 RPS4XP3-201ENST00000398541 413 ntBASIC2.99□□□□□ -1.93
CUX2O14529 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CUX2O14529 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.99□□□□□ -1.93
CUX2O14529 AC106883.1-201ENST00000418805 562 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms