Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.36□□□□□ -2.19
SDCBPO00560 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.36□□□□□ -2.19
SDCBPO00560 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SDCBPO00560 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.36□□□□□ -2.19
SDCBPO00560 SNORA25.15-201ENST00000516487 89 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU6-250P-201ENST00000516958 103 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU6-334P-201ENST00000517072 102 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU6-840P-201ENST00000517275 65 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.36□□□□□ -2.19
SDCBPO00560 AP003497.1-201ENST00000528472 562 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC022880.1-201ENST00000534017 973 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 MIR4287-201ENST00000579398 78 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC011494.1-201ENST00000596454 237 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AL445435.1-201ENST00000604232 665 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC069304.2-201ENST00000605154 435 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC069294.1-201ENST00000608397 350 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AL354696.1-201ENST00000614652 497 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AL159972.1-201ENST00000625150 448 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SDCBPO00560 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SDCBPO00560 AC107982.1-201ENST00000507171 1300 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AL138713.1-201ENST00000624026 2130 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU6-778P-201ENST00000363269 103 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 U8.14-201ENST00000390843 143 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 RNU6-952P-201ENST00000391164 108 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SDCBPO00560 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SDCBPO00560 RN7SKP101-201ENST00000411376 320 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SDCBPO00560 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AL161449.1-201ENST00000414531 1199 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.35□□□□□ -2.19
SDCBPO00560 MTCO2P5-201ENST00000422621 426 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 UBE2D3P3-201ENST00000426992 425 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 HMGN2P3-201ENST00000433603 273 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 HMGN2P5-201ENST00000436882 273 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.35□□□□□ -2.19
SDCBPO00560 BX322784.1-201ENST00000455793 1077 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC069528.1-202ENST00000482888 637 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC020699.1-201ENST00000505161 445 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 MTCO3P15-201ENST00000526563 574 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AP000889.1-201ENST00000530968 660 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 AL355297.2-201ENST00000604792 129 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AL139344.1-201ENST00000605228 195 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC005332.6-201ENST00000613178 446 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC243773.3-201ENST00000613270 256 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC091834.1-201ENST00000614543 472 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AC078880.5-201ENST00000617845 421 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.35□□□□□ -2.19
SDCBPO00560 AC002543.1-201ENST00000299783 1954 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 ZNF702P-202ENST00000434269 1966 ntBASIC1.35□□□□□ -2.19
SDCBPO00560 AL356473.1-201ENST00000406203 1408 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SDCBPO00560 AC110491.1-201ENST00000562191 2010 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.34□□□□□ -2.19
SDCBPO00560 RNU6-637P-201ENST00000384050 107 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AL627390.1-201ENST00000396055 340 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.34□□□□□ -2.19
SDCBPO00560 AC068533.2-201ENST00000411872 306 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 BTF3P8-201ENST00000414577 526 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.34□□□□□ -2.19
SDCBPO00560 RPS3AP44-201ENST00000425466 790 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 MTND4P15-201ENST00000437913 1033 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 COX7BP2-201ENST00000437976 242 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 RPL21P134-201ENST00000453468 483 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 RPL23AP3-201ENST00000453844 468 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 MTCO1P42-201ENST00000457379 726 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 RNU7-136P-201ENST00000458819 69 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC023790.1-201ENST00000482174 347 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC026801.1-201ENST00000497178 464 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 MTND4P2-201ENST00000507767 1203 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AF213884.2-201ENST00000510417 903 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
SDCBPO00560 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.34□□□□□ -2.19
SDCBPO00560 RNA5SP291-201ENST00000517222 105 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.34□□□□□ -2.19
SDCBPO00560 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.34□□□□□ -2.19
SDCBPO00560 MTCO2P15-201ENST00000532655 656 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 HIGD1AP17-201ENST00000554576 276 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC007151.1-201ENST00000572774 483 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC024619.4-201ENST00000580924 316 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC004805.2-201ENST00000605382 482 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC068276.1-201ENST00000605793 379 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC008759.3-201ENST00000613300 508 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC104763.3-201ENST00000613765 618 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 AC010133.1-201ENST00000615809 842 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 ZNF876P-202ENST00000398732 1485 ntBASIC1.34□□□□□ -2.19
SDCBPO00560 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms