Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
O00370 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.98□□□□□ -1.93
O00370 AC124947.2-202ENST00000552735 133 ntBASIC2.98□□□□□ -1.93
O00370 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
O00370 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.98□□□□□ -1.93
O00370 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
O00370 AC013553.2-201ENST00000604244 589 ntBASIC2.98□□□□□ -1.93
O00370 AC064872.1-201ENST00000604823 1072 ntBASIC2.98□□□□□ -1.93
O00370 MIR98-201ENST00000606724 119 ntBASIC2.98□□□□□ -1.93
O00370 AC004852.3-201ENST00000614131 326 ntBASIC2.98□□□□□ -1.93
O00370 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.98□□□□□ -1.93
O00370 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
O00370 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.98□□□□□ -1.93
O00370 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
O00370 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
O00370 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
O00370 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
O00370 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
O00370 RNY1P12-201ENST00000364251 105 ntBASIC2.97□□□□□ -1.93
O00370 OR5H15-201ENST00000383696 930 ntBASIC2.97□□□□□ -1.93
O00370 RNU6-701P-201ENST00000384059 107 ntBASIC2.97□□□□□ -1.93
O00370 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
O00370 RPL23AP32-201ENST00000395315 459 ntBASIC2.97□□□□□ -1.93
O00370 RPL21P75-201ENST00000396599 483 ntBASIC2.97□□□□□ -1.93
O00370 RPL21P28-201ENST00000401418 483 ntBASIC2.97□□□□□ -1.93
O00370 FO393413.1-201ENST00000402892 195 ntBASIC2.97□□□□□ -1.93
O00370 AL592114.1-201ENST00000403842 483 ntBASIC2.97□□□□□ -1.93
O00370 AL359634.1-202ENST00000404721 284 ntBASIC2.97□□□□□ -1.93
O00370 NDUFS5P1-201ENST00000405668 289 ntBASIC2.97□□□□□ -1.93
O00370 DLGAP5P1-201ENST00000430307 464 ntBASIC2.97□□□□□ -1.93
O00370 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.97□□□□□ -1.93
O00370 USP12PX-201ENST00000432383 1057 ntBASIC2.97□□□□□ -1.93
O00370 AL513043.1-201ENST00000439124 535 ntBASIC2.97□□□□□ -1.93
O00370 MTND1P12-201ENST00000455231 147 ntBASIC2.97□□□□□ -1.93
O00370 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.97□□□□□ -1.93
O00370 RPL21P39-201ENST00000463605 483 ntBASIC2.97□□□□□ -1.93
O00370 AC008571.1-201ENST00000467232 300 ntBASIC2.97□□□□□ -1.93
O00370 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.97□□□□□ -1.93
O00370 RPL21P93-201ENST00000480465 489 ntBASIC2.97□□□□□ -1.93
O00370 AC233702.1-201ENST00000482905 502 ntBASIC2.97□□□□□ -1.93
O00370 AC087190.1-201ENST00000484462 480 ntBASIC2.97□□□□□ -1.93
O00370 AC093591.1-201ENST00000491435 481 ntBASIC2.97□□□□□ -1.93
O00370 RPL21P16-201ENST00000495531 483 ntBASIC2.97□□□□□ -1.93
O00370 AC117522.3-201ENST00000507974 584 ntBASIC2.97□□□□□ -1.93
O00370 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.97□□□□□ -1.93
O00370 MTCO3P7-201ENST00000510008 774 ntBASIC2.97□□□□□ -1.93
O00370 AC079140.3-201ENST00000511111 550 ntBASIC2.97□□□□□ -1.93
O00370 RNU6-1220P-201ENST00000517126 108 ntBASIC2.97□□□□□ -1.93
O00370 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.97□□□□□ -1.93
O00370 HPRT1P3-201ENST00000539521 576 ntBASIC2.97□□□□□ -1.93
O00370 EIF4BP1-201ENST00000554881 351 ntBASIC2.97□□□□□ -1.93
O00370 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.97□□□□□ -1.93
O00370 AC010620.2-201ENST00000600135 313 ntBASIC2.97□□□□□ -1.93
O00370 AL035413.2-201ENST00000604801 525 ntBASIC2.97□□□□□ -1.93
O00370 AC090578.1-201ENST00000604955 591 ntBASIC2.97□□□□□ -1.93
O00370 AL033523.1-201ENST00000605153 153 ntBASIC2.97□□□□□ -1.93
O00370 AL136363.1-201ENST00000605349 337 ntBASIC2.97□□□□□ -1.93
O00370 AC005046.1-201ENST00000608515 625 ntBASIC2.97□□□□□ -1.93
O00370 AC091304.9-201ENST00000612091 226 ntBASIC2.97□□□□□ -1.93
O00370 AC090132.2-201ENST00000615881 347 ntBASIC2.97□□□□□ -1.93
O00370 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.97□□□□□ -1.93
O00370 AC006386.2-201ENST00000624491 75 ntBASIC2.97□□□□□ -1.93
O00370 AC012005.1-201ENST00000624575 75 ntBASIC2.97□□□□□ -1.93
O00370 PISRT1-201ENST00000626175 531 ntBASIC2.97□□□□□ -1.93
O00370 SCARNA15.3-201ENST00000626315 122 ntBASIC2.97□□□□□ -1.93
O00370 SCARNA4.1-201ENST00000628597 123 ntBASIC2.97□□□□□ -1.93
O00370 AL137790.1-201ENST00000634283 177 ntBASIC2.97□□□□□ -1.93
O00370 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.97□□□□□ -1.93
O00370 AC138915.1-201ENST00000565427 1685 ntBASIC2.96□□□□□ -1.94
O00370 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
O00370 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
O00370 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.94
O00370 RNU4-75P-201ENST00000364621 146 ntBASIC2.96□□□□□ -1.94
O00370 RNU6-1180P-201ENST00000364935 107 ntBASIC2.96□□□□□ -1.94
O00370 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
O00370 U3.26-201ENST00000391236 204 ntBASIC2.96□□□□□ -1.94
O00370 DEFB108C-201ENST00000400154 252 ntBASIC2.96□□□□□ -1.94
O00370 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 AL592148.1-201ENST00000413568 445 ntBASIC2.96□□□□□ -1.94
O00370 NDUFB4P7-201ENST00000423198 363 ntBASIC2.96□□□□□ -1.94
O00370 AL589823.1-201ENST00000429577 183 ntBASIC2.96□□□□□ -1.94
O00370 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.96□□□□□ -1.94
O00370 AL358934.1-201ENST00000432346 324 ntBASIC2.96□□□□□ -1.94
O00370 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.96□□□□□ -1.94
O00370 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.96□□□□□ -1.94
O00370 DDX3P2-201ENST00000446138 111 ntBASIC2.96□□□□□ -1.94
O00370 RBM43P1-201ENST00000476891 1081 ntBASIC2.96□□□□□ -1.94
O00370 RPS3AP14-201ENST00000483907 780 ntBASIC2.96□□□□□ -1.94
O00370 RPS27P26-201ENST00000494583 239 ntBASIC2.96□□□□□ -1.94
O00370 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.96□□□□□ -1.94
O00370 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.96□□□□□ -1.94
O00370 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
O00370 Vault.3-201ENST00000516676 95 ntBASIC2.96□□□□□ -1.94
O00370 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
O00370 AC011979.2-201ENST00000527568 352 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms