Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC118465.1-201ENST00000513820 1271 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC103810.1-201ENST00000579873 453 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AC083760.1-201ENST00000589621 670 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 AL589994.2-201ENST00000621124 579 ntBASIC2.54□□□□□ -2
NPIPA2E9PIF3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA2E9PIF3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA2E9PIF3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPIPA2E9PIF3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPIPA2E9PIF3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 SNORD115.1-201ENST00000391109 76 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AF228730.1-201ENST00000397972 663 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL513475.1-201ENST00000406602 315 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 MTND2P18-201ENST00000419962 1030 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC104651.1-201ENST00000427559 735 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC092427.1-202ENST00000430569 476 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 MTND1P28-201ENST00000435623 950 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 GSTA11P-201ENST00000452866 669 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 RN7SL432P-201ENST00000484057 298 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC012065.4-201ENST00000602445 679 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AL161798.1-201ENST00000604630 131 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC103710.2-201ENST00000609912 942 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC034102.8-201ENST00000615146 484 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 AC009878.1-201ENST00000621819 340 ntBASIC2.53□□□□□ -2
NPIPA2E9PIF3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA2E9PIF3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.53□□□□□ -2.01
NPIPA2E9PIF3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RNU6-288P-201ENST00000363690 104 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RNU5A-2P-201ENST00000384337 116 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RNU6-14P-201ENST00000384630 106 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 MT-TH-201ENST00000387441 69 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RAC1P6-201ENST00000423911 575 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC092447.3-201ENST00000426027 686 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 HMGB1P27-201ENST00000431429 603 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AL513043.1-201ENST00000439124 535 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RPS15AP7-201ENST00000439294 405 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 MTND4P25-201ENST00000441039 533 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AL109933.2-201ENST00000452651 260 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RPL37P6-201ENST00000460682 294 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC109486.1-201ENST00000486833 374 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 RNA5SP165-201ENST00000517142 115 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AP003122.4-201ENST00000530980 758 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 OR1M4P-201ENST00000589199 287 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 HMGN1P30-201ENST00000589286 268 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 NRBF2P5-201ENST00000603087 788 ntBASIC2.52□□□□□ -2.01
NPIPA2E9PIF3 AC112191.3-201ENST00000604371 277 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms