Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SNORD62.1-201ENST00000362541 86 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 SNORA5B-201ENST00000363786 132 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 SNORA25.6-201ENST00000364121 118 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 RNU6-114P-201ENST00000384704 105 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 SNORA40.3-201ENST00000390964 122 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 HMGN1P14-201ENST00000412459 517 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 RPL17P12-201ENST00000413391 526 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC099548.1-201ENST00000421443 426 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC007283.2-201ENST00000424739 197 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AL365496.1-201ENST00000426885 215 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AL714022.1-201ENST00000439897 151 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 Z82210.1-201ENST00000440037 231 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 USP9YP12-201ENST00000450481 570 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC087588.1-201ENST00000462203 316 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC233702.1-201ENST00000482905 502 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 RPS27P27-201ENST00000498779 255 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 MTND3P5-201ENST00000512798 333 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AP000873.5-201ENST00000533906 236 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC009977.1-201ENST00000586015 570 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AL161729.4-201ENST00000604650 476 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC008498.1-201ENST00000613012 531 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AC011939.3-201ENST00000613686 466 ntBASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 RNU1-100P-201ENST00000365255 165 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 FO393413.1-201ENST00000402892 195 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 RNU6-516P-201ENST00000411381 104 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 MTND1P21-201ENST00000412991 285 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC080125.1-201ENST00000414888 684 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 UBE2V1P13-201ENST00000436983 439 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 ELOCP30-201ENST00000447108 299 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AP000705.1-201ENST00000454567 350 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 RNA5SP216-201ENST00000516111 123 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AP002963.1-201ENST00000530590 184 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 TRAV28-201ENST00000557548 323 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 MIR4528-201ENST00000577763 90 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC060771.1-201ENST00000582031 164 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC005498.1-201ENST00000592125 465 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC112191.3-201ENST00000604371 277 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC087752.4-201ENST00000605911 462 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC004492.1-201ENST00000607036 742 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 UCA1.1-201ENST00000620952 75 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 AC092447.10-201ENST00000620607 1652 ntBASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49BA6NDI0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 MIR887-201ENST00000401258 79 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 MIR1305-201ENST00000408300 86 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 RNU2-66P-201ENST00000410650 161 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AL589872.1-201ENST00000426602 288 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 MTCO3P5-201ENST00000433620 714 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 PGBD4P3-201ENST00000440731 581 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AL049734.2-201ENST00000441066 616 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 DDX3P2-201ENST00000446138 111 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 TPT1P14-201ENST00000448018 505 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 KLF3P2-201ENST00000465138 268 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC126182.1-201ENST00000478134 357 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 MTND2P33-201ENST00000506452 1031 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 ARL2BPP4-201ENST00000506854 471 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC068587.4-201ENST00000533893 186 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 GTF3AP2-201ENST00000557014 266 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AL157394.1-201ENST00000562983 1224 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms