Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 RPL39P38-201ENST00000467018 153 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 RN7SL691P-201ENST00000494487 301 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 RNA5SP497-201ENST00000516081 97 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 RNU6-397P-201ENST00000516226 104 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC006130.2-201ENST00000586202 326 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC008121.1-201ENST00000603244 268 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AL645944.1-201ENST00000603857 493 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC008962.1-201ENST00000605729 304 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AC112484.5-201ENST00000624189 228 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 AL672167.1-203ENST00000641299 2975 ntBASIC5.34□□□□□ -1.55
USP17L3A6NCW0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
USP17L3A6NCW0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
USP17L3A6NCW0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 DHX9P1-201ENST00000436565 3076 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.64-201ENST00000362845 102 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RNA5SP283-201ENST00000365604 119 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.515-201ENST00000384535 112 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 MIR10A-201ENST00000385043 110 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AL117339.3-201ENST00000418733 162 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 NDUFB4P7-201ENST00000423198 363 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 HMGN2P27-201ENST00000427352 270 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RPL23AP45-201ENST00000476406 468 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC023424.1-201ENST00000496058 459 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RNU6-1023P-201ENST00000516137 106 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.680-201ENST00000516441 93 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RNA5SP49-201ENST00000516450 115 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC091144.1-201ENST00000519573 138 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AC034114.1-201ENST00000520293 285 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 TVP23BP1-201ENST00000557500 617 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 MED28P6-201ENST00000558776 231 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 RN7SL600P-201ENST00000581811 299 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 MIR3128-201ENST00000581957 66 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 SNRPGP15-201ENST00000600149 222 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AP002826.1-201ENST00000608835 315 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.33□□□□□ -1.56
USP17L3A6NCW0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
USP17L3A6NCW0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 SNORA20.1-201ENST00000364790 130 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.471-201ENST00000384312 102 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 MIR34A-201ENST00000385130 110 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AL356095.1-201ENST00000417217 199 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 CYP4F29P-201ENST00000420685 446 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 RPL30P10-201ENST00000488148 337 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AL132838.2-201ENST00000492041 314 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 RNU6-897P-201ENST00000517135 105 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 RNA5SP291-201ENST00000517222 105 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AC109329.1-201ENST00000518744 317 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AMZ2P1-203ENST00000565833 850 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 HMGB2P1-201ENST00000591146 634 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 AL161629.2-201ENST00000615347 275 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.32□□□□□ -1.56
USP17L3A6NCW0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.32□□□□□ -1.56
USP17L3A6NCW0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 Y_RNA.60-201ENST00000362831 98 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 RNU6-1181P-201ENST00000384191 106 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 RNU2-33P-201ENST00000410344 192 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AL590383.1-201ENST00000428602 75 ntBASIC5.31□□□□□ -1.56
USP17L3A6NCW0 AL117339.2-201ENST00000430475 180 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms