Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RNU6-123P-201ENST00000516163 102 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 Y_RNA.695-201ENST00000516715 107 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC189A1A4V9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AC103843.2-201ENST00000530523 682 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC189A1A4V9 MIR548AC-201ENST00000585049 88 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AC087045.1-201ENST00000605856 382 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AC087752.4-201ENST00000605911 462 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AC025034.2-201ENST00000623264 286 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 AL157786.1-207ENST00000627771 695 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC189A1A4V9 ELL2P3-201ENST00000457883 1602 ntBASIC3.37□□□□□ -1.87
CCDC189A1A4V9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RNU6-61P-201ENST00000365528 109 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 Z98749.2-208ENST00000381646 500 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RNU6-166P-201ENST00000384371 107 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RAB9AP3-201ENST00000412737 573 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RAB9AP1-201ENST00000449393 573 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AC116655.1-201ENST00000508324 901 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 OR5AQ1P-201ENST00000527596 927 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 VN1R85P-201ENST00000601587 426 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 AC068790.2-201ENST00000602601 557 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 RPL23AP88-201ENST00000605759 454 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 Z69908.1-201ENST00000622603 247 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 MTND4P27-201ENST00000450813 1354 ntBASIC3.36□□□□□ -1.87
CCDC189A1A4V9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC189A1A4V9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AL359854.1-201ENST00000614203 1594 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 RNA5SP124-201ENST00000362739 110 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 CISD1P1-201ENST00000393907 327 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC244505.5-201ENST00000443639 207 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 snoU13.22-201ENST00000459428 104 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 RPL22P13-201ENST00000493291 347 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 EIF4EP3-201ENST00000498782 656 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 FCF1P8-201ENST00000510322 597 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 RNA5SP112-201ENST00000515937 99 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 BTF3P12-201ENST00000519620 469 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC126118.1-201ENST00000607744 628 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AL356321.1-201ENST00000621360 228 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 AC068724.3-201ENST00000625906 87 ntBASIC3.35□□□□□ -1.87
CCDC189A1A4V9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC189A1A4V9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 Y_RNA.77-201ENST00000362962 107 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 U3.6-201ENST00000363622 211 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 RNU1-109P-201ENST00000383960 147 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 MIR1193-201ENST00000408109 78 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 MIR1302-8-201ENST00000408342 128 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 RN7SKP58-201ENST00000411010 305 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 HMGN2P35-201ENST00000412164 270 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 RPL31P35-201ENST00000431058 377 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AL627311.1-201ENST00000431514 115 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 KATNBL1P3-201ENST00000443475 909 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 Z99127.3-201ENST00000448158 395 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AL672167.3-201ENST00000465951 960 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC189A1A4V9 MTND4LP31-201ENST00000514859 294 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 RNU6-581P-201ENST00000516214 105 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 Y_RNA.688-201ENST00000516565 95 ntBASIC3.34□□□□□ -1.87
CCDC189A1A4V9 RNU6-685P-201ENST00000517088 95 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms