Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 AL031176.1-201ENST00000604554 466 ntBASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TCRBV3S1A0A5B6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MTCO1P23-201ENST00000415223 1526 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MIR424-201ENST00000362227 98 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-252P-201ENST00000363232 107 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL109755.1-201ENST00000401791 649 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL121978.1-201ENST00000402778 359 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MTND2P29-201ENST00000438595 412 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL022238.1-201ENST00000442557 355 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 GDI2P2-201ENST00000445131 608 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 HMGN2P23-201ENST00000456759 269 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 RPS20P22-201ENST00000473700 357 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC093852.1-201ENST00000503587 266 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AL359212.1-201ENST00000556608 614 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC007151.1-201ENST00000572774 483 ntBASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TCRBV3S1A0A5B6 MTND5P30-201ENST00000452896 1731 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 MIR30A-201ENST00000385092 71 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RPL23AP29-201ENST00000397284 453 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 MIR888-201ENST00000401186 77 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-77P-201ENST00000410554 91 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RPS24P7-201ENST00000416921 246 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC241584.1-201ENST00000438469 1241 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC009238.1-201ENST00000442165 424 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC009237.6-201ENST00000446969 424 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RPL26P9-201ENST00000457466 433 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC098799.1-201ENST00000504752 800 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC008837.1-201ENST00000511513 412 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RNA5SP445-201ENST00000515889 115 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AL132857.1-201ENST00000555180 708 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC093510.2-201ENST00000562820 896 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 GAS5-AS1-201ENST00000602767 694 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC107905.1-201ENST00000616204 426 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC007490.1-201ENST00000624321 703 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 AC005832.2-201ENST00000538921 1430 ntBASIC0.95□□□□□ -2.26
TCRBV3S1A0A5B6 RNU6-140P-201ENST00000384566 108 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 PSMA6P3-201ENST00000428242 164 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 IGJP1-201ENST00000522682 475 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AP005660.1-201ENST00000522972 293 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AP003066.2-201ENST00000529375 555 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 AC136601.2-201ENST00000604356 474 ntBASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TCRBV3S1A0A5B6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 SNORA40.19-201ENST00000390846 128 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 RPL21P90-201ENST00000415692 466 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 EIF4EP2-201ENST00000422816 654 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 ZNF863P-201ENST00000426746 417 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 HMGB1P27-201ENST00000431429 603 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 HMGB3P12-201ENST00000438745 556 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 COX6CP18-201ENST00000448769 222 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 AC244505.3-201ENST00000454598 187 ntBASIC0.93□□□□□ -2.26
TCRBV3S1A0A5B6 RNA5SP57-201ENST00000459463 123 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms