Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 BNIP3P6-201ENST00000549284 499 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL138889.2-201ENST00000603883 242 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL161798.1-201ENST00000604630 131 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AL390240.1-201ENST00000612950 384 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV7S3A2A0A539 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.88
TCRBV7S3A2A0A539 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.88
TCRBV7S3A2A0A539 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.34□□□□□ -1.88
TCRBV7S3A2A0A539 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 UBE2L2-201ENST00000254302 429 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.279-201ENST00000364763 95 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-805P-201ENST00000365643 106 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MIR490-201ENST00000384865 128 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 SNORD37.1-201ENST00000390968 65 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RN7SKP202-201ENST00000410439 330 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RPL21P111-201ENST00000418453 477 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 ERLEC1P1-201ENST00000433806 578 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC007389.2-201ENST00000434630 306 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC104058.1-201ENST00000448028 297 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 HMGN2P26-201ENST00000463169 339 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AL160314.1-201ENST00000490836 438 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC093663.1-201ENST00000497190 394 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MTCO2P30-201ENST00000503662 364 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MTCO3P9-201ENST00000506989 781 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RNA5SP471-201ENST00000516971 106 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 CENPUP1-201ENST00000526649 1202 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC078814.3-201ENST00000553036 491 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MIR4644-201ENST00000579929 84 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC018638.8-201ENST00000588755 281 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AL162713.1-201ENST00000604480 262 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-89P-201ENST00000606519 100 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 MIR15A-201ENST00000607334 83 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC004825.2-201ENST00000616634 455 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 uc_338.34-201ENST00000617467 174 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC009033.1-201ENST00000624279 431 ntBASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV7S3A2A0A539 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.72-201ENST00000362894 103 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-1127P-201ENST00000384580 107 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 CISD1P1-201ENST00000393907 327 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL592114.1-201ENST00000403842 483 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6ATAC-201ENST00000408749 126 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 ARL5AP1-201ENST00000418991 388 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL160275.3-201ENST00000423876 471 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC018644.1-201ENST00000429934 551 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC091286.1-201ENST00000431233 461 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL121601.2-201ENST00000438019 707 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL133547.1-201ENST00000448546 220 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MTND5P20-201ENST00000448677 143 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AP000852.1-201ENST00000472460 573 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms