Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 UBL5P1-201ENST00000507979 193 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 RN7SKP157-201ENST00000516174 282 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP404-201ENST00000517118 132 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 NACAP3-201ENST00000552100 481 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC012414.6-201ENST00000568241 401 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC002400.1-201ENST00000569310 726 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 DNAJC19P3-201ENST00000594491 331 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 ELOCP5-201ENST00000604924 333 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC069304.2-201ENST00000605154 435 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AL137790.1-201ENST00000634283 177 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC009950.2-201ENST00000636548 183 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AL391516.1-201ENST00000554380 2449 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 AP005901.5-201ENST00000545779 1796 ntBASIC0.55□□□□□ -2.32
LINC01558Q9Y6Z2 MTCO1P23-201ENST00000415223 1526 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC002543.1-201ENST00000299783 1954 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 RNU5E-1-201ENST00000362477 120 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 SNORA51.6-201ENST00000384151 125 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL121978.1-201ENST00000402778 359 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL590084.1-201ENST00000407885 387 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 RNU4-53P-201ENST00000410828 140 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC097463.2-201ENST00000421074 142 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL590233.1-201ENST00000430017 456 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC011825.1-201ENST00000484967 388 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 MTCYBP16-201ENST00000509187 1129 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC112198.4-201ENST00000515450 351 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 CENPUP1-201ENST00000526649 1202 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 CYCSP27-201ENST00000527643 293 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC090079.2-201ENST00000575289 768 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 SNORD53B-201ENST00000577887 78 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AP001542.2-201ENST00000593141 364 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL713866.2-201ENST00000603579 219 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 CYP2C61P-201ENST00000604072 290 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC239803.2-201ENST00000610161 430 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC012676.2-201ENST00000619258 186 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL590396.2-201ENST00000636511 1041 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AC083865.1-201ENST00000636634 831 ntBASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
LINC01558Q9Y6Z2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RNU6-26P-201ENST00000383985 107 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 MIR146A-201ENST00000385201 99 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP100-201ENST00000410903 110 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RNA5SP59-201ENST00000410922 110 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RPL7P34-201ENST00000433316 712 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AL161651.1-201ENST00000440882 223 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 PPIAP20-201ENST00000449839 135 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RPL9P6-201ENST00000492764 598 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 COX7A2P2-201ENST00000505291 250 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RNU6-667P-201ENST00000517186 102 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AP003122.3-201ENST00000526316 255 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 RAB11AP2-201ENST00000545905 639 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 ROCK1P1-201ENST00000573767 549 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 MIR4319-201ENST00000577285 85 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 GAS5-AS1-201ENST00000602767 694 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AL078604.3-201ENST00000615580 211 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC008121.3-201ENST00000618726 433 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 MIR8057-201ENST00000620957 69 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 AC091965.5-201ENST00000624785 342 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.53□□□□□ -2.32
LINC01558Q9Y6Z2 SEC63P2-201ENST00000503863 1939 ntBASIC0.52□□□□□ -2.33
LINC01558Q9Y6Z2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
LINC01558Q9Y6Z2 RNU1-22P-201ENST00000363334 158 ntBASIC0.52□□□□□ -2.33
LINC01558Q9Y6Z2 RNU4-13P-201ENST00000364019 141 ntBASIC0.52□□□□□ -2.33
LINC01558Q9Y6Z2 MIR554-201ENST00000384874 96 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms