Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
HRH3Q9Y5N1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AL450326.2-201ENST00000421913 1962 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RNU6-741P-201ENST00000383889 107 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.441-201ENST00000384123 112 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RNU6-959P-201ENST00000384671 107 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 MIR585-201ENST00000384887 94 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RNA5SP44-201ENST00000410446 133 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RN7SKP125-201ENST00000410481 302 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC108075.1-201ENST00000424692 529 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC024067.1-201ENST00000426199 223 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RPS5P7-201ENST00000456664 608 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC092754.1-201ENST00000472975 479 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 RNY3P16-201ENST00000516338 101 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AL590392.1-201ENST00000604960 446 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AL139124.1-201ENST00000609123 421 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC010632.3-201ENST00000611377 369 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC244107.2-201ENST00000611773 76 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC091953.5-201ENST00000622919 233 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 AC093535.2-201ENST00000624769 2326 ntBASIC4.89□□□□□ -1.63
HRH3Q9Y5N1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ADAM5-202ENST00000399789 1942 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC092681.1-201ENST00000297369 291 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RNA5SP361-201ENST00000362686 118 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.136-201ENST00000363444 102 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RNU6-1175P-201ENST00000365200 107 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 SNORD116-18-201ENST00000383961 92 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RNU6-20P-201ENST00000384106 107 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.570-201ENST00000384750 101 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.597-201ENST00000410463 100 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RNU6-735P-201ENST00000410612 107 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RN7SKP213-201ENST00000410746 298 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC096638.1-201ENST00000444678 216 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 SNRPCP2-201ENST00000504370 475 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 HMGB1P40-201ENST00000525121 540 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 MIR4782-201ENST00000577987 79 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AL138963.2-201ENST00000605137 226 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC068831.7-201ENST00000616954 363 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC241585.2-209ENST00000638217 143 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 MAPK10-349ENST00000641767 3661 ntBASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HRH3Q9Y5N1 AC135776.4-201ENST00000624300 1904 ntBASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 AL034549.2-201ENST00000618285 3373 ntBASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 AC023421.1-201ENST00000590535 1785 ntBASIC4.87□□□□□ -1.63
HRH3Q9Y5N1 Y_RNA.331-201ENST00000365267 102 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms