Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 MTND4P14-201ENST00000435799 1354 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC032011.1-201ENST00000611703 1549 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC007823.1-201ENST00000569932 1566 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC007256.1-201ENST00000392253 2765 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-552P-201ENST00000362869 119 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 Y_RNA.231-201ENST00000364358 102 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA24.1-201ENST00000384401 135 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-510P-201ENST00000391239 108 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC110754.1-201ENST00000399740 601 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC114491.1-201ENST00000416095 246 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RPL21P10-201ENST00000463521 490 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RPL23AP55-201ENST00000498163 452 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC092436.1-201ENST00000506450 503 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-390P-201ENST00000516259 103 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SKP60-201ENST00000516985 239 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 IGHV3-76-201ENST00000522465 295 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC022690.1-201ENST00000526681 550 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC243972.3-201ENST00000539655 198 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC023050.3-201ENST00000541142 333 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC037471.2-201ENST00000564941 598 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC024619.4-201ENST00000580924 316 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC087045.1-201ENST00000605856 382 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC011155.2-201ENST00000623202 216 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 AL353746.1-201ENST00000566293 6881 ntBASIC3.85□□□□□ -1.79
SSX2IPQ9Y2D8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RNU1-33P-201ENST00000364249 162 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RNA5SP189-201ENST00000364920 115 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-61P-201ENST00000365528 109 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 MIR591-201ENST00000385290 95 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AL606923.1-201ENST00000406616 190 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RPL35AP12-201ENST00000425362 338 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 DUTP6-201ENST00000425573 462 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 ERLEC1P1-201ENST00000433806 578 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RPL7P12-201ENST00000446719 750 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 GAPDHP27-201ENST00000447427 1020 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 SNRPFP3-201ENST00000457792 225 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SKP209-201ENST00000516888 304 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 OR4H12P-201ENST00000556269 907 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 SNRPGP15-201ENST00000600149 222 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AL022099.1-201ENST00000604551 712 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 BRDTP1-201ENST00000605735 677 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 AL136221.1-201ENST00000621449 509 ntBASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.84□□□□□ -1.79
SSX2IPQ9Y2D8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 API5P2-201ENST00000397055 1498 ntBASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSX2IPQ9Y2D8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 SNORA7.2-201ENST00000364446 145 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-335P-201ENST00000364563 113 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms