Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL138880.2-201ENST00000616214 239 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 SNHG22-203ENST00000617833 660 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 RNU6-511P-201ENST00000363496 107 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 RNY4P14-201ENST00000363656 96 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.453-201ENST00000384223 109 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 EI24P2-201ENST00000397776 1076 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 RN7SKP285-201ENST00000410137 318 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 PPP1R11P2-201ENST00000423543 382 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 RPL35AP12-201ENST00000425362 338 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AL590383.1-201ENST00000428602 75 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AC027673.1-201ENST00000456245 405 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 MTCO3P38-201ENST00000468910 766 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.693-201ENST00000516641 110 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 RNU6-1220P-201ENST00000517126 108 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AF038458.1-201ENST00000588406 262 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AC007014.2-201ENST00000615581 479 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 AC110801.1-201ENST00000623590 212 ntBASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK11AQ9UQ88 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 Y_RNA.159-201ENST00000363674 87 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 RNU6-1322P-201ENST00000364309 107 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 RNU1-39P-201ENST00000383897 165 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 Y_RNA.409-201ENST00000383990 98 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MIR184-201ENST00000384962 84 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 RNU6-1197P-201ENST00000391183 107 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 SNORA48.8-201ENST00000391324 134 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MIR1277-201ENST00000408536 78 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MED13P1-201ENST00000428342 171 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 RPL21P40-201ENST00000428586 483 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC000111.3-201ENST00000433478 193 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AL596276.1-201ENST00000434465 418 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 HMGB3P12-201ENST00000438745 556 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC008885.1-201ENST00000514930 301 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 SCARNA24.1-201ENST00000516465 137 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC092325.1-201ENST00000566449 554 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC025678.1-201ENST00000567861 338 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 HMGB1P6-201ENST00000569046 646 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MIR4293-201ENST00000584305 78 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AL033523.1-201ENST00000605153 153 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AP001330.5-201ENST00000607176 411 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MIR7106-201ENST00000612419 65 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 MIR3688-2-201ENST00000636963 87 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC093536.2-201ENST00000565257 1406 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC110774.1-201ENST00000623567 2018 ntBASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.02□□□□□ -1.61
CDK11AQ9UQ88 AC093908.1-201ENST00000623125 8092 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC073343.1-201ENST00000328239 651 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 SNORA23-201ENST00000365128 182 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 MIR558-201ENST00000384920 94 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 TXNP7-201ENST00000406296 293 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 RNA5SP229-201ENST00000410809 99 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 OR2AS1P-201ENST00000427827 319 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 USP12PX-201ENST00000432383 1057 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 RPS20P5-201ENST00000434808 360 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 RPL31P60-201ENST00000478450 367 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 RPL30P5-201ENST00000494923 336 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 SNORA31.22-201ENST00000517204 135 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC109635.3-201ENST00000529536 185 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 AC068135.2-201ENST00000569293 1028 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 MIR622-201ENST00000638396 96 ntBASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDK11AQ9UQ88 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK11AQ9UQ88 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDK11AQ9UQ88 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK11AQ9UQ88 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5□□□□□ -1.61
CDK11AQ9UQ88 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDK11AQ9UQ88 RPS4XP8-201ENST00000402039 771 ntBASIC5□□□□□ -1.61
CDK11AQ9UQ88 USP9YP27-201ENST00000418455 438 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms