Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 OR51H2P-202ENST00000641424 3046 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 AP000560.1-201ENST00000624150 1937 ntBASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.66□□□□□ -1.66
AP4E1Q9UPM8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
AP4E1Q9UPM8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
AP4E1Q9UPM8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNU1-76P-201ENST00000362903 159 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNY1-201ENST00000364228 113 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNU6-1317P-201ENST00000364582 104 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNU6-708P-201ENST00000384217 107 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 SNORA70E-201ENST00000384492 135 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNU6-1179P-201ENST00000384667 107 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 SNORA69.1-201ENST00000390904 137 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 SNORD58.1-201ENST00000391313 66 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 GLULP6-201ENST00000399502 913 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 EIF4A1P3-201ENST00000411521 244 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AL590139.1-201ENST00000416267 400 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC007098.1-201ENST00000420122 367 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 C4BPAP2-201ENST00000428434 478 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 HSPD1P21-201ENST00000436541 245 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AL139109.1-201ENST00000455491 297 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC098869.1-201ENST00000481627 292 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC007686.1-201ENST00000488511 463 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 APOOP4-201ENST00000513530 597 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RNU6-927P-201ENST00000516199 100 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 MIR5696-201ENST00000578474 85 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 AC034102.8-201ENST00000615146 484 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 MIR7703-201ENST00000620784 77 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 Z99571.1-201ENST00000636677 394 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 MAPK10-304ENST00000641341 3984 ntBASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.65□□□□□ -1.67
AP4E1Q9UPM8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 MIR335-201ENST00000362173 94 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.150-201ENST00000363562 102 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RNU6-595P-201ENST00000363944 107 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.274-201ENST00000364714 101 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP505-201ENST00000364748 108 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RNU1-44P-201ENST00000384453 163 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RPS16P5-201ENST00000406501 404 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RN7SKP167-201ENST00000411047 285 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RPL7AP25-201ENST00000423357 805 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL451062.2-201ENST00000427515 271 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL592045.1-201ENST00000429867 352 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL159987.2-201ENST00000432754 307 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL121871.1-201ENST00000443413 436 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AC011753.3-201ENST00000443436 406 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AC008897.1-201ENST00000494006 347 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 MIR892C-201ENST00000516410 77 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 RNU6-1315P-201ENST00000517187 99 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AC073410.2-201ENST00000603240 332 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 AL355877.2-201ENST00000603670 358 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
AP4E1Q9UPM8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.29-201ENST00000362570 113 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 RNU6-280P-201ENST00000364145 104 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.237-201ENST00000364439 102 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms