Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR518C-201ENST00000384822 101 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RN7SKP266-201ENST00000410232 287 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNA5SP181-201ENST00000410246 98 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNA5SP508-201ENST00000411327 119 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC006366.1-201ENST00000422002 759 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 ARPC3P1-201ENST00000437218 533 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 MTCO2P18-201ENST00000457151 658 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 BZW1P2-201ENST00000473537 826 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AL049874.1-201ENST00000489560 388 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC093809.1-201ENST00000509155 340 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC010486.1-201ENST00000511793 424 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC022447.1-201ENST00000515358 464 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC024909.2-201ENST00000553035 286 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 MIR4446-201ENST00000578505 67 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AP001094.1-201ENST00000579805 193 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 MIR4435-1-201ENST00000582552 80 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC080078.2-201ENST00000603766 501 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC005332.10-201ENST00000612725 619 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AL031667.3-201ENST00000620124 655 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 AC009902.3-201ENST00000606235 2172 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 DDX10P1-201ENST00000448545 1933 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC135776.4-201ENST00000624300 1904 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 Y_RNA.553-201ENST00000384670 102 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 U3.20-201ENST00000390909 217 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL590084.2-201ENST00000401481 382 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RNU6-757P-201ENST00000410334 100 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RNU6-193P-201ENST00000410977 107 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AF274854.1-201ENST00000413236 615 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 SPA17P1-201ENST00000416656 452 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC008850.1-201ENST00000427546 362 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 UBE2V1P13-201ENST00000436983 439 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AL135752.1-201ENST00000479477 471 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC093281.2-201ENST00000510153 597 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC008716.1-201ENST00000511084 513 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 ELOCP32-201ENST00000548625 324 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 DUXAP1-201ENST00000556632 463 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC087465.1-201ENST00000560574 245 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 MIR5194-201ENST00000582634 120 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC087752.4-201ENST00000605911 462 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RN7SKP299-201ENST00000606679 301 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RNU6-88P-201ENST00000606801 100 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 AC073114.1-201ENST00000612027 490 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 OR5H6-203ENST00000642105 978 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 OR4G2P-202ENST00000641004 1759 ntBASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP2Q9UDT6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 RNU6-270P-201ENST00000364131 105 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 SNORA4.1-201ENST00000364263 144 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 Y_RNA.560-201ENST00000384689 102 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 RNU6-516P-201ENST00000411381 104 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 NPM1P11-201ENST00000417106 855 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 RPS3AP44-201ENST00000425466 790 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 RPL35AP22-201ENST00000436855 335 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 snoU13.28-201ENST00000459235 104 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC128713.1-201ENST00000471495 306 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms