Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-1256P-201ENST00000516539 103 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 CYP4A43P-201ENST00000568156 121 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC100830.2-201ENST00000581636 240 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC018462.2-201ENST00000605375 395 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AL355810.1-201ENST00000614629 552 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 MIR8059-201ENST00000620427 81 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 MTND4P1-201ENST00000457501 1466 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.112-201ENST00000363250 102 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.404-201ENST00000383978 102 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 MIR301A-201ENST00000385261 86 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 RNA5SP239-201ENST00000410218 129 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 NUTF2P7-201ENST00000453086 375 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AL359273.1-201ENST00000510918 627 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 RNU6-976P-201ENST00000516086 111 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AC104576.1-201ENST00000524225 88 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 ELOCP5-201ENST00000604924 333 ntBASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCMF1Q9P0J7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RNU6-328P-201ENST00000390887 106 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RPL23AP48-201ENST00000406913 488 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RNU6-293P-201ENST00000411259 106 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RNU6-607P-201ENST00000411283 108 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 Z99755.1-201ENST00000414048 380 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 EI24P1-201ENST00000416584 867 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC113618.1-201ENST00000416747 285 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC022493.1-201ENST00000492984 337 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC008716.1-201ENST00000511084 513 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC006499.6-201ENST00000511169 607 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RN7SKP295-201ENST00000517264 153 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC087369.1-201ENST00000520775 996 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 IFITM8P-201ENST00000522529 394 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC025884.1-201ENST00000556034 378 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AL157871.3-201ENST00000557231 293 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 MIR3921-201ENST00000577308 85 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 MIR1273C-201ENST00000578669 77 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC136443.5-201ENST00000603741 370 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AP002826.1-201ENST00000608835 315 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC011890.2-201ENST00000613393 294 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AL161423.1-201ENST00000613700 262 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 SNORD39.4-201ENST00000620099 78 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC008785.1-201ENST00000624475 456 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 AC068724.3-201ENST00000625906 87 ntBASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms