Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC007823.1-201ENST00000569932 1566 ntBASIC4.15□□□□□ -1.74
VTA1Q9NP79 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.15□□□□□ -1.74
VTA1Q9NP79 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VTA1Q9NP79 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VTA1Q9NP79 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VTA1Q9NP79 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.15□□□□□ -1.74
VTA1Q9NP79 UBE2L2-201ENST00000254302 429 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 Y_RNA.11-201ENST00000362375 109 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-1167P-201ENST00000363227 94 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-288P-201ENST00000363690 104 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-522P-201ENST00000364497 107 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-393P-201ENST00000384475 107 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-1127P-201ENST00000384580 107 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNVU1-14-201ENST00000384770 164 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 MIR491-201ENST00000384877 84 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 USP9YP20-201ENST00000419224 558 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL645937.1-202ENST00000421799 937 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL365400.1-201ENST00000431854 640 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 IFNA20P-201ENST00000436840 528 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 RNU6-914P-201ENST00000516749 109 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 PSMA2P1-201ENST00000526365 646 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AC243972.3-201ENST00000539655 198 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 OR11H5P-201ENST00000554039 926 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 MIR4644-201ENST00000579929 84 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 MIR5692A1-201ENST00000580523 69 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 Z82243.1-201ENST00000609432 473 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 uc_338.32-201ENST00000615087 172 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 Y_RNA.804-201ENST00000615262 101 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VTA1Q9NP79 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AC091953.5-201ENST00000622919 233 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 AC090617.10-201ENST00000624308 134 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 AL359693.1-201ENST00000614959 2407 ntBASIC4.15□□□□□ -1.75
VTA1Q9NP79 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.15□□□□□ -1.75
VTA1Q9NP79 MTND4P35-201ENST00000604257 1375 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC022336.2-201ENST00000568966 2538 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 Y_RNA.142-201ENST00000363491 102 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 RNU6-1013P-201ENST00000384180 107 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 Y_RNA.534-201ENST00000384599 112 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 CISD1P1-201ENST00000393907 327 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 RNU2-33P-201ENST00000410344 192 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 Z85995.1-201ENST00000415547 335 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 BX842559.1-201ENST00000419615 532 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 TAAR7P-201ENST00000436141 242 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC004801.2-202ENST00000463559 283 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC012181.1-201ENST00000479895 423 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 AP001086.1-201ENST00000494882 321 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 FAM206BP-201ENST00000510179 541 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 RNU6-1256P-201ENST00000516539 103 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 SNORA70.24-201ENST00000517233 118 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC004024.1-201ENST00000549244 247 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 MIR15A-201ENST00000607334 83 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC092807.2-201ENST00000609367 243 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 U2.17-201ENST00000611454 95 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 uc_338.5-201ENST00000611839 155 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC090132.2-201ENST00000615881 347 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AC009248.2-201ENST00000619826 254 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 AL136221.1-201ENST00000621449 509 ntBASIC4.14□□□□□ -1.75
VTA1Q9NP79 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VTA1Q9NP79 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
VTA1Q9NP79 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 AL133383.2-201ENST00000622958 2336 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 RNU6-525P-201ENST00000363685 104 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 RNA5SP50-201ENST00000363731 107 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms