Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC092747.3-201ENST00000603769 301 ntBASIC4.27□□□□□ -1.73
CD248Q9HCU0 PLCE1P1-201ENST00000622094 305 ntBASIC4.27□□□□□ -1.73
CD248Q9HCU0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD248Q9HCU0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.27□□□□□ -1.73
CD248Q9HCU0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD248Q9HCU0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD248Q9HCU0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD248Q9HCU0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD248Q9HCU0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD248Q9HCU0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD248Q9HCU0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 Y_RNA.80-201ENST00000362996 102 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU6-82P-201ENST00000363970 107 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU6-99P-201ENST00000364721 107 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 Y_RNA.463-201ENST00000384271 102 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNY1P14-201ENST00000384426 108 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU6-1026P-201ENST00000384465 108 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 PTMAP5-201ENST00000393073 333 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 EIF4E2P1-201ENST00000393781 255 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AL360182.1-201ENST00000397433 468 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU6-628P-201ENST00000410675 107 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU4-6P-201ENST00000410804 122 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 DPH3P2-201ENST00000422618 250 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC006517.1-201ENST00000480485 328 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 UBE2CP3-201ENST00000502715 450 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC104057.1-201ENST00000515547 497 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 RNU2-10P-201ENST00000516375 211 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC024224.1-201ENST00000538284 609 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC006064.5-201ENST00000541782 248 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 MIR3690-201ENST00000580266 75 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC053481.4-201ENST00000583164 216 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 MIR3158-1-201ENST00000583596 81 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AL355812.1-201ENST00000603215 216 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 MIR6875-201ENST00000617506 72 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 CDC27P3-201ENST00000635418 1910 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 KPNA2P1-201ENST00000458289 1591 ntBASIC4.26□□□□□ -1.73
CD248Q9HCU0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.26□□□□□ -1.73
CD248Q9HCU0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD248Q9HCU0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CD248Q9HCU0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD248Q9HCU0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNU6-179P-201ENST00000363350 107 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 Y_RNA.153-201ENST00000363615 91 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNU6-593P-201ENST00000364716 112 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 SNORD116-11-201ENST00000383882 92 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNU6-890P-201ENST00000384121 107 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 MIR23B-201ENST00000384832 97 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 MIR19A-201ENST00000384878 82 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNU6-328P-201ENST00000390887 106 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RNU11-4P-201ENST00000391149 133 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 POLHP1-201ENST00000411806 470 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 ATG3P1-201ENST00000419507 911 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 RAC1P6-201ENST00000423911 575 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AL669831.1-202ENST00000428504 417 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.25□□□□□ -1.73
CD248Q9HCU0 RPS24P6-201ENST00000452670 400 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 VN1R105P-201ENST00000486595 910 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC113195.1-201ENST00000579952 141 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 COX6CP3-201ENST00000580869 223 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC011890.2-201ENST00000613393 294 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 FAM157A-202ENST00000615155 405 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC006133.1-201ENST00000617106 264 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC011155.2-201ENST00000623202 216 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 AC092608.2-201ENST00000624427 218 ntBASIC4.25□□□□□ -1.73
CD248Q9HCU0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD248Q9HCU0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CD248Q9HCU0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD248Q9HCU0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD248Q9HCU0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD248Q9HCU0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD248Q9HCU0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.24□□□□□ -1.73
CD248Q9HCU0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CD248Q9HCU0 Y_RNA.307-201ENST00000365022 117 ntBASIC4.24□□□□□ -1.73
CD248Q9HCU0 Y_RNA.489-201ENST00000384410 101 ntBASIC4.24□□□□□ -1.73
CD248Q9HCU0 RNU6-278P-201ENST00000390945 109 ntBASIC4.24□□□□□ -1.73
CD248Q9HCU0 MIR1911-201ENST00000410783 80 ntBASIC4.24□□□□□ -1.73
CD248Q9HCU0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 367.4 ms