Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC022364.2-201ENST00000457963 554 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 SNORD97-201ENST00000459187 142 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RPL7P5-201ENST00000471472 736 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL049874.1-201ENST00000489560 388 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 FAM92A1P2-202ENST00000504766 877 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RNA5SP468-201ENST00000516782 93 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AP003034.1-201ENST00000534621 422 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL359212.1-201ENST00000556608 614 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MED28P6-201ENST00000558776 231 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC007363.1-201ENST00000604736 620 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 SDR42E1P2-201ENST00000614861 481 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MTND5P1-201ENST00000445440 1375 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RNY4P14-201ENST00000363656 96 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.367-201ENST00000365544 101 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RPS4XP8-201ENST00000402039 771 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 CIR1P3-201ENST00000405137 479 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 MRPL50P2-201ENST00000416821 482 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RPL7L1P10-201ENST00000427790 463 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 MED13P1-201ENST00000428342 171 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 NFU1P2-201ENST00000448700 469 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RN7SL807P-201ENST00000470923 297 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RNU6-1281P-201ENST00000516223 105 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RNU6-1092P-201ENST00000516955 87 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC100870.1-201ENST00000522035 505 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RPS3AP4-201ENST00000555161 764 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC055876.1-202ENST00000567053 138 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC068135.2-201ENST00000569293 1028 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 DPPA3P3-201ENST00000603842 430 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AC093788.1-201ENST00000609356 927 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 AL354950.2-201ENST00000617939 290 ntBASIC3.22□□□□□ -1.89
PCDH9Q9HC56 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH9Q9HC56 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC073343.1-201ENST00000328239 651 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 SNORD46.1-201ENST00000364139 104 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 SNORA62.1-201ENST00000364287 154 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 Y_RNA.481-201ENST00000384373 102 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 NDUFS5P1-201ENST00000405668 289 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 HSPE1P1-201ENST00000421494 318 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC018630.2-202ENST00000422992 927 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 MTND1P2-201ENST00000430604 821 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 FDX1P2-201ENST00000450769 375 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 RNU6-420P-201ENST00000458780 107 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC126389.1-201ENST00000477436 290 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC116562.3-201ENST00000506136 177 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC117522.1-201ENST00000509821 380 ntBASIC3.21□□□□□ -1.9
PCDH9Q9HC56 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms