Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC087241.2-201ENST00000535801 324 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 OR11H5P-201ENST00000554039 926 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 PSMA3P-201ENST00000555485 635 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 MIR548AC-201ENST00000585049 88 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC009994.1-201ENST00000606889 253 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 Z82243.1-201ENST00000609432 473 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AL110115.1-201ENST00000614396 364 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC009248.2-201ENST00000619826 254 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 AC006504.1-201ENST00000562493 3666 ntBASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM54Q9BYV2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 Y_RNA.530-201ENST00000384587 101 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 RNA5SP219-201ENST00000390940 113 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 RPL32P23-201ENST00000397237 405 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AL512844.2-201ENST00000433990 593 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC092573.2-201ENST00000434546 243 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC093019.1-201ENST00000443135 252 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AP000763.2-201ENST00000540641 163 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 OR8R1P-201ENST00000543943 764 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 AC005344.1-201ENST00000613391 459 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 MIR6875-201ENST00000617506 72 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 RNA5SP196-201ENST00000625967 102 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM54Q9BYV2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 SNORA4.3-201ENST00000365564 137 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 Y_RNA.399-201ENST00000383955 105 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RNU6-45P-201ENST00000384471 107 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 MIR325-201ENST00000385260 98 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RNA5SP424-201ENST00000390988 115 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 SNORA16.2-201ENST00000390991 127 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RN7SKP27-201ENST00000410684 333 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 BX682237.1-201ENST00000415016 335 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AL645937.1-202ENST00000421799 937 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 MTCO3P46-201ENST00000425787 232 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AL365400.1-201ENST00000431854 640 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RPS24P13-201ENST00000442520 397 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 FABP5P15-201ENST00000453566 214 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC083904.1-201ENST00000487828 231 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 SUMO2P6-201ENST00000505273 288 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RN7SKP256-201ENST00000517201 314 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC107953.1-201ENST00000522216 297 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AL157871.3-201ENST00000557231 293 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC005668.1-201ENST00000571142 476 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 MIR1273C-201ENST00000578669 77 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 MIR3941-201ENST00000582572 103 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 LARP7P1-201ENST00000605576 316 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AC022418.1-201ENST00000624118 445 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AL049641.1-201ENST00000441055 1948 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 AP001148.1-201ENST00000624124 2359 ntBASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM54Q9BYV2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms