Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC091965.2-201ENST00000512324 613 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC004923.2-201ENST00000529649 369 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC005034.5-201ENST00000604219 466 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AL450336.1-201ENST00000605180 586 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AC008133.2-201ENST00000624540 351 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 AL442644.1-201ENST00000454390 3105 ntBASIC1.38□□□□□ -2.19
SCAPERQ9BY12 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SCAPERQ9BY12 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 RNU2-41P-201ENST00000410991 178 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 RPS15AP38-201ENST00000413110 372 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AL513185.3-201ENST00000433335 1300 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 PNPLA4P1-201ENST00000458328 305 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AC008676.3-201ENST00000521237 435 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AC008562.1-201ENST00000521763 330 ntBASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.37□□□□□ -2.19
SCAPERQ9BY12 CCT4P2-201ENST00000233836 1548 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.36□□□□□ -2.19
SCAPERQ9BY12 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.36□□□□□ -2.19
SCAPERQ9BY12 RPL31P53-201ENST00000457065 348 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 AC087588.1-201ENST00000462203 316 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 CBX3P3-201ENST00000508108 532 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 MRPS33P3-201ENST00000513456 322 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 AC008494.2-201ENST00000514544 370 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SCAPERQ9BY12 AC004852.3-201ENST00000614131 326 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 AC025048.6-202ENST00000627667 438 ntBASIC1.36□□□□□ -2.19
SCAPERQ9BY12 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SCAPERQ9BY12 MIR767-201ENST00000390228 109 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 PRRC2CP1-201ENST00000404428 159 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AL356131.1-201ENST00000405826 414 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC004941.2-201ENST00000427009 228 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 USP12PX-201ENST00000432383 1057 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 HSPE1P21-201ENST00000438283 308 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 MTATP6P7-201ENST00000453315 681 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC055731.1-201ENST00000474387 401 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AP001960.1-201ENST00000506494 658 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AP005902.1-201ENST00000521358 186 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC090888.1-201ENST00000561335 1141 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC079148.1-201ENST00000565944 819 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 FAM71BP1-201ENST00000604431 523 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC103710.4-201ENST00000609301 899 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AL138955.1-201ENST00000622881 1040 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 AC027309.3-201ENST00000623419 351 ntBASIC1.35□□□□□ -2.19
SCAPERQ9BY12 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.35□□□□□ -2.19
SCAPERQ9BY12 SNORA23-201ENST00000365128 182 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 MTATP6P31-201ENST00000406985 692 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.34□□□□□ -2.19
SCAPERQ9BY12 SFR1P2-201ENST00000421841 730 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AC023512.1-201ENST00000444513 499 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 RNF138P1-201ENST00000502765 546 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 MRPS36P2-201ENST00000512569 299 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AC005498.1-201ENST00000592125 465 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AC078899.2-201ENST00000595282 212 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 AL592148.2-201ENST00000612210 372 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 MIR7515-201ENST00000637837 67 ntBASIC1.34□□□□□ -2.19
SCAPERQ9BY12 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SCAPERQ9BY12 MIR193B-201ENST00000384907 83 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 RPS3AP24-201ENST00000407896 734 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SCAPERQ9BY12 snoU13.28-201ENST00000459235 104 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SCAPERQ9BY12 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.33□□□□□ -2.2
SCAPERQ9BY12 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.33□□□□□ -2.2
SCAPERQ9BY12 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.33□□□□□ -2.2
SCAPERQ9BY12 MIR4504-201ENST00000577413 92 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 AC025165.5-201ENST00000602802 578 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 AC012443.1-201ENST00000605605 231 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 MIR6513-201ENST00000621188 64 ntBASIC1.33□□□□□ -2.2
SCAPERQ9BY12 DEFB108F-201ENST00000344638 222 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 RNU6-452P-201ENST00000384406 107 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AL512604.1-201ENST00000404812 257 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 UBE2V1P9-201ENST00000414760 368 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC021146.8-201ENST00000507455 733 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 POLR2KP1-201ENST00000553226 168 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 RNU6-1074P-201ENST00000383995 104 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms