Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FDX1P2-201ENST00000450769 375 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 SUMO2P2-201ENST00000456482 255 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 RPS20P24-201ENST00000457473 361 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC135721.1-201ENST00000497954 479 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AP004247.1-201ENST00000531556 1289 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 MIR4307-201ENST00000582802 84 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 BNIP3P23-201ENST00000599655 511 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC012065.4-201ENST00000602445 679 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC012669.1-201ENST00000603209 283 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AP001330.4-201ENST00000604350 154 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 HSPE1P7-201ENST00000604681 321 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AL158063.1-201ENST00000615349 536 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC027807.2-201ENST00000616099 408 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC008443.7-201ENST00000622195 246 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AL390237.1-201ENST00000404226 1415 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 AC092104.1-201ENST00000497346 1441 ntBASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RSPO3Q9BXY4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU6-28P-201ENST00000362378 107 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 Y_RNA.77-201ENST00000362962 107 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU5F-6P-201ENST00000362979 116 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU6-744P-201ENST00000365557 107 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU6-1316P-201ENST00000384242 108 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MIR320C1-201ENST00000408566 88 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RN7SKP266-201ENST00000410232 287 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU2-47P-201ENST00000410649 186 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MTATP6P27-201ENST00000416987 621 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MTND1P28-201ENST00000435623 950 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RPL31P3-201ENST00000458430 332 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC073901.1-201ENST00000462471 408 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MTND4LP3-201ENST00000468320 276 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RBM43P1-201ENST00000476891 1081 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RPL23AP70-201ENST00000483361 460 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC096751.1-202ENST00000502691 1067 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC022447.1-201ENST00000515358 464 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 SNRPGP16-201ENST00000533275 226 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AP000873.5-201ENST00000533906 236 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC103810.1-201ENST00000579873 453 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MIR4524B-201ENST00000581569 115 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC103987.3-201ENST00000582071 292 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC090616.3-201ENST00000582184 217 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AL353997.4-201ENST00000586196 166 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC073544.2-201ENST00000601155 540 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 BBIP1P1-201ENST00000602999 279 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC004987.4-201ENST00000603383 338 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC025034.2-201ENST00000623264 286 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 AC068880.5-201ENST00000624331 290 ntBASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RSPO3Q9BXY4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 AL356473.1-201ENST00000406203 1408 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 Y_RNA.234-201ENST00000364409 97 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 Y_RNA.436-201ENST00000384097 102 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 SNORD51-201ENST00000384320 80 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 DLGAP5P1-201ENST00000430307 464 ntBASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.12□□□□□ -2.07
RSPO3Q9BXY4 SNRPEP7-201ENST00000438350 220 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms