Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 PIGFP2-201ENST00000421400 651 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.89□□□□□ -1.95
CPNE1Q99829 RPL36AP53-201ENST00000432891 316 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AL591212.2-201ENST00000433923 257 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.89□□□□□ -1.95
CPNE1Q99829 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AL122001.1-201ENST00000457027 370 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 MTCO2P18-201ENST00000457151 658 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC093899.1-201ENST00000457984 376 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC004924.1-201ENST00000480160 781 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC006445.1-201ENST00000491925 405 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC117522.1-201ENST00000509821 380 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
CPNE1Q99829 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC079140.3-201ENST00000511111 550 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.89□□□□□ -1.95
CPNE1Q99829 MTCO3P28-201ENST00000513351 515 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 SCARNA24.1-201ENST00000516465 137 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC090572.1-201ENST00000519251 160 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 PSMA2P1-201ENST00000526365 646 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPNE1Q99829 AP002963.1-201ENST00000530590 184 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.89□□□□□ -1.95
CPNE1Q99829 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.89□□□□□ -1.95
CPNE1Q99829 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 MIR3913-1-201ENST00000577744 102 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
CPNE1Q99829 AC068790.2-201ENST00000602601 557 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC008739.3-201ENST00000603262 127 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC069234.5-201ENST00000611056 416 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.89□□□□□ -1.95
CPNE1Q99829 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CPNE1Q99829 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.88□□□□□ -1.95
CPNE1Q99829 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.88□□□□□ -1.95
CPNE1Q99829 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CPNE1Q99829 Y_RNA.22-201ENST00000362492 102 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 RNA5SP72-201ENST00000364442 117 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CPNE1Q99829 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.88□□□□□ -1.95
CPNE1Q99829 HMGN2P30-201ENST00000423237 256 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AL592045.1-201ENST00000429867 352 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AC079781.2-201ENST00000446424 169 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 RPL26P9-201ENST00000457466 433 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 AC026427.2-201ENST00000506228 536 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 RNU6-410P-201ENST00000517006 107 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 RNU6-430P-201ENST00000517078 107 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 MTCO2P4-201ENST00000517968 247 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.88□□□□□ -1.95
CPNE1Q99829 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CPNE1Q99829 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.88□□□□□ -1.95
CPNE1Q99829 MIR3611-201ENST00000584484 83 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 AC022893.3-201ENST00000607665 437 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 DUSP12P1-201ENST00000612874 516 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 AP003399.1-201ENST00000637534 361 ntBASIC2.88□□□□□ -1.95
CPNE1Q99829 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CPNE1Q99829 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CPNE1Q99829 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CPNE1Q99829 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
CPNE1Q99829 AC008669.1-201ENST00000565823 2178 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
CPNE1Q99829 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CPNE1Q99829 MIR7-3-201ENST00000384898 110 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 AL109913.1-201ENST00000421173 514 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 AC133104.1-201ENST00000429100 218 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 RPL23AP30-201ENST00000432419 501 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 MTCO3P5-201ENST00000433620 714 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 GPR143P-201ENST00000434155 205 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.87□□□□□ -1.95
CPNE1Q99829 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
CPNE1Q99829 AC114786.4-201ENST00000508771 728 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.87□□□□□ -1.95
CPNE1Q99829 RN7SKP298-201ENST00000515950 94 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.87□□□□□ -1.95
CPNE1Q99829 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.87□□□□□ -1.95
CPNE1Q99829 OR5B19P-201ENST00000531766 928 ntBASIC2.87□□□□□ -1.95
CPNE1Q99829 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms