Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.56□□□□□ -2.32
COL12A1Q99715 Y_RNA.804-201ENST00000615262 101 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL12A1Q99715 AC244453.4-201ENST00000419150 388 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AC013268.2-201ENST00000420753 337 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AC246680.2-201ENST00000422106 389 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 SNRPEP4-201ENST00000435815 279 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 OSTCP8-201ENST00000445117 448 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 C1DP3-201ENST00000455013 423 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AL135752.1-201ENST00000479477 471 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.56□□□□□ -2.32
COL12A1Q99715 RNU6-758P-201ENST00000516292 89 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL12A1Q99715 AC009220.3-201ENST00000604318 586 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.56□□□□□ -2.32
COL12A1Q99715 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.56□□□□□ -2.32
COL12A1Q99715 AL118508.4-201ENST00000624142 1176 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 CBX3P1-201ENST00000325243 554 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 SNORA63.3-201ENST00000362682 132 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.56□□□□□ -2.32
COL12A1Q99715 HMGN2P21-201ENST00000447764 270 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 SSXP4-201ENST00000451349 245 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AC010285.1-201ENST00000470580 392 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AL355297.2-201ENST00000604792 129 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AP000654.2-201ENST00000605633 586 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 SDR42E1P2-201ENST00000614861 481 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 SDR42E1P4-201ENST00000620894 481 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.56□□□□□ -2.32
COL12A1Q99715 AC080100.1-201ENST00000624239 5356 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 MIR627-201ENST00000384979 97 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 SFR1P1-201ENST00000403720 688 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 SNRPEP7-201ENST00000438350 220 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 RNU1-98P-201ENST00000458992 160 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 RPS27P23-201ENST00000487608 251 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 AP003485.1-201ENST00000625093 753 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC110079.1-202ENST00000635213 138 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 Y_RNA.288-201ENST00000364854 92 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC241520.1-201ENST00000422654 1099 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 AC010099.1-201ENST00000455434 375 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.55□□□□□ -2.32
COL12A1Q99715 RN7SKP34-201ENST00000516142 244 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 RNA5SP468-201ENST00000516782 93 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 CYCSP2-201ENST00000558168 301 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 MIR4287-201ENST00000579398 78 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.55□□□□□ -2.32
COL12A1Q99715 AC240442.1-201ENST00000616055 283 ntBASIC0.55□□□□□ -2.32
COL12A1Q99715 SNORA14A-201ENST00000364773 135 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 RNU6-185P-201ENST00000384421 107 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 RPL31P52-201ENST00000407532 367 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 RPS27P26-201ENST00000494583 239 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.54□□□□□ -2.32
COL12A1Q99715 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.54□□□□□ -2.32
COL12A1Q99715 MIR3690-201ENST00000580266 75 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
COL12A1Q99715 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.54□□□□□ -2.32
COL12A1Q99715 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 AL353689.1-201ENST00000438895 199 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 KLRA1P-201ENST00000503499 986 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 RNU1-61P-201ENST00000516107 151 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 RNU6-964P-201ENST00000516524 69 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.54□□□□□ -2.32
COL12A1Q99715 AC084033.1-201ENST00000550830 633 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 AC021646.1-201ENST00000605469 484 ntBASIC0.54□□□□□ -2.32
COL12A1Q99715 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL12A1Q99715 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.54□□□□□ -2.32
COL12A1Q99715 RNA5SP118-201ENST00000410385 109 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 AC022022.1-201ENST00000430304 178 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 AC118469.1-201ENST00000442943 488 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 AC068714.1-201ENST00000559623 800 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.53□□□□□ -2.32
COL12A1Q99715 AC009974.1-201ENST00000608881 455 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.53□□□□□ -2.32
COL12A1Q99715 RNU4-42P-201ENST00000364738 142 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.53□□□□□ -2.32
COL12A1Q99715 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.53□□□□□ -2.32
COL12A1Q99715 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.53□□□□□ -2.32
COL12A1Q99715 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.53□□□□□ -2.32
COL12A1Q99715 AC097499.1-201ENST00000444277 208 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 TRBVB-201ENST00000477100 408 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 PCNAP1-201ENST00000505363 709 ntBASIC0.53□□□□□ -2.32
COL12A1Q99715 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.53□□□□□ -2.33
COL12A1Q99715 SNRPFP2-201ENST00000440710 251 ntBASIC0.53□□□□□ -2.33
COL12A1Q99715 AL035666.1-201ENST00000446195 348 ntBASIC0.53□□□□□ -2.33
COL12A1Q99715 RPL37P6-202ENST00000464216 403 ntBASIC0.53□□□□□ -2.33
COL12A1Q99715 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.53□□□□□ -2.33
COL12A1Q99715 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.53□□□□□ -2.33
COL12A1Q99715 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
COL12A1Q99715 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.53□□□□□ -2.33
COL12A1Q99715 OSBPL9P3-201ENST00000534523 595 ntBASIC0.53□□□□□ -2.33
COL12A1Q99715 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.53□□□□□ -2.33
COL12A1Q99715 Y_RNA.100-201ENST00000363141 102 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms