Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 HMGB3P30-201ENST00000457863 606 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 RNU7-66P-201ENST00000459469 62 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 RN7SL330P-201ENST00000469709 307 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC010631.1-201ENST00000474150 156 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AP000926.1-201ENST00000479573 241 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 HMGB1P22-201ENST00000505315 124 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC091885.1-201ENST00000506658 268 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 NDUFB4P9-201ENST00000511646 388 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AP001486.3-201ENST00000615334 372 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC110801.1-201ENST00000623590 212 ntBASIC3.81□□□□□ -1.8
HAPLN3Q96S86 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
HAPLN3Q96S86 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC009812.4-201ENST00000569134 1805 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 Y_RNA.100-201ENST00000363141 102 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 SNORD115-7-201ENST00000365306 82 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 SNORA70.4-201ENST00000365509 134 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 RNU6-61P-201ENST00000365528 109 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 Y_RNA.378-201ENST00000365652 113 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 Y_RNA.431-201ENST00000384086 102 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AL606923.1-201ENST00000406616 190 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 USP9YP20-201ENST00000419224 558 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 MTATP6P4-201ENST00000427725 675 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 YME1L1P1-201ENST00000429435 297 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 PRPS1P1-201ENST00000445305 876 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 GAPDHP27-201ENST00000447427 1020 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 snoU13.24-201ENST00000458998 104 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC096576.1-201ENST00000489014 359 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 VN1R104P-201ENST00000505115 1009 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 HMGN1P11-201ENST00000508668 303 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 KLHL2P1-201ENST00000508691 521 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 RNA5SP503-201ENST00000517047 117 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AP001804.3-201ENST00000525146 880 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 OR4H12P-201ENST00000556269 907 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AC103710.3-201ENST00000608157 948 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AL121772.2-201ENST00000614331 297 ntBASIC3.8□□□□□ -1.8
HAPLN3Q96S86 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HAPLN3Q96S86 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 RNU6-173P-201ENST00000364215 104 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 NCOR1P3-201ENST00000420479 303 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 NDUFB1P1-201ENST00000435191 180 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 USP9YP7-201ENST00000436723 430 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 CYCSP43-201ENST00000438233 310 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 USP9YP32-201ENST00000452432 430 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 SNORD19B-201ENST00000459623 84 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 RPL23AP11-201ENST00000475260 469 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC083904.1-201ENST00000487828 231 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 Vault.1-201ENST00000516474 102 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 RANP9-201ENST00000519957 271 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC020661.2-201ENST00000560114 134 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 POLR3GP2-201ENST00000588366 668 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 BNIP3P25-201ENST00000596023 559 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC004696.1-201ENST00000614345 607 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 uc_338.11-201ENST00000619132 160 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC025034.2-201ENST00000623264 286 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 AC012442.3-202ENST00000636742 206 ntBASIC3.79□□□□□ -1.8
HAPLN3Q96S86 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HAPLN3Q96S86 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms