Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SNORA25B-201ENST00000365507 128 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 MIR16-1-201ENST00000385271 89 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SNORA40.18-201ENST00000391200 128 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC093422.3-201ENST00000428506 305 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 RPS29P23-201ENST00000458635 123 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SNORD121B-201ENST00000458838 81 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC068587.2-201ENST00000478386 781 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC024224.1-201ENST00000538284 609 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC090502.2-201ENST00000549267 280 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 MIR4255-201ENST00000579351 72 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 SGO1P1-201ENST00000603525 1447 ntBASIC1.11□□□□□ -2.23
AP1S3Q96PC3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
AP1S3Q96PC3 AL033519.2-201ENST00000403958 392 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 MIR1304-201ENST00000408243 91 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AL160275.3-201ENST00000423876 471 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 MTND4P24-201ENST00000424002 397 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC008850.1-201ENST00000427546 362 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AL121601.2-201ENST00000438019 707 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC092170.1-201ENST00000440211 356 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 HSPE1P24-201ENST00000450782 238 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 SMURF2P1-201ENST00000514992 481 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC124293.1-201ENST00000530034 493 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC008127.2-201ENST00000549925 1075 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 SUB1P3-201ENST00000564581 315 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AP001429.1-201ENST00000602568 530 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC133794.1-201ENST00000602731 914 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AC091152.3-201ENST00000604227 325 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP1S3Q96PC3 MTND5P11-201ENST00000511037 1812 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 MTND5P10-201ENST00000603719 1809 ntBASIC1.1□□□□□ -2.23
AP1S3Q96PC3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC091812.1-201ENST00000432235 1948 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 MIR449A-201ENST00000362113 91 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 RNU6-778P-201ENST00000363269 103 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 MIR517C-201ENST00000385103 95 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 BTF3P8-201ENST00000414577 526 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 CCDC58P2-201ENST00000417131 366 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AL445669.1-201ENST00000426743 755 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AL035407.1-201ENST00000429211 571 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 USP9YP34-201ENST00000453983 808 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC117503.1-201ENST00000472241 394 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC048346.1-201ENST00000510247 144 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 RNA5SP291-201ENST00000517222 105 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AL356432.3-201ENST00000568952 465 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC091834.1-201ENST00000614543 472 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 MIR5739-201ENST00000619803 80 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC091953.2-201ENST00000623979 160 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 MIR3199-2-201ENST00000636243 86 ntBASIC1.09□□□□□ -2.23
AP1S3Q96PC3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S3Q96PC3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
AP1S3Q96PC3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
AP1S3Q96PC3 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.09□□□□□ -2.24
AP1S3Q96PC3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
AP1S3Q96PC3 RNA5SP240-201ENST00000365355 128 ntBASIC1.08□□□□□ -2.24
AP1S3Q96PC3 MIR30A-201ENST00000385092 71 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms