Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC43Q96MW1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC43Q96MW1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.84□□□□□ -1.96
CCDC43Q96MW1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC43Q96MW1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AL391994.1-201ENST00000254724 282 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 RNU6-660P-201ENST00000364566 109 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 RNU6-443P-201ENST00000384780 107 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AL353729.1-201ENST00000425044 720 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AL354941.1-201ENST00000438600 464 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 TRBV1-201ENST00000476502 284 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC139453.3-201ENST00000493276 369 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC022447.1-201ENST00000515358 464 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 RNA5SP148-201ENST00000516527 94 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC024619.4-201ENST00000580924 316 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC112187.2-201ENST00000604345 283 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AL589743.7-201ENST00000612637 233 ntBASIC2.83□□□□□ -1.96
CCDC43Q96MW1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CCDC43Q96MW1 AC080128.1-201ENST00000474389 1917 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RNY4P24-201ENST00000362735 96 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RNU6-14P-201ENST00000384630 106 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 U8.14-201ENST00000390843 143 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC236972.1-201ENST00000433225 199 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RPL23AP45-201ENST00000476406 468 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC116347.2-201ENST00000514912 523 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RN7SKP24-201ENST00000515888 284 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 RNU4-29P-201ENST00000515943 174 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC123904.2-201ENST00000548059 300 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 MRPS36P5-201ENST00000551909 298 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC021739.1-201ENST00000559631 174 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC135507.1-201ENST00000607214 561 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 AC107294.1-201ENST00000609524 467 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 U4.3-201ENST00000621047 82 ntBASIC2.82□□□□□ -1.96
CCDC43Q96MW1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC43Q96MW1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 RNU6-658P-201ENST00000384606 106 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 TAS2R15P-201ENST00000390674 928 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 RPS20P2-201ENST00000402520 389 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 ELOCP17-201ENST00000414751 326 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 NEFMP1-201ENST00000443423 1006 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 Z73417.1-201ENST00000447373 778 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 RPL23AP20-201ENST00000447965 421 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 SNORD11.1-201ENST00000459482 85 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 RPS27P27-201ENST00000498779 255 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 SNORA31.6-201ENST00000516241 130 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 BTF3P12-201ENST00000519620 469 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 MIR3146-201ENST00000580367 79 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AP001004.1-201ENST00000582468 324 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 MIR4672-201ENST00000583126 81 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC025588.2-201ENST00000604851 466 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC144521.1-201ENST00000607148 956 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC025594.3-201ENST00000613068 790 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 ADAM3A-203ENST00000461344 2157 ntBASIC2.81□□□□□ -1.96
CCDC43Q96MW1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC43Q96MW1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms