Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC119751.5-201ENST00000514077 770 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC42Q96M95 KATNBL1P5-201ENST00000605015 517 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC002550.2-201ENST00000621246 394 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 MIR3199-2-201ENST00000636243 86 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC42Q96M95 AL359854.1-201ENST00000614203 1594 ntBASIC1.66□□□□□ -2.14
CCDC42Q96M95 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC42Q96M95 AC005539.1-201ENST00000443768 1479 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL356421.1-201ENST00000403255 413 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL158050.1-201ENST00000416077 457 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 TAF13P2-201ENST00000416876 286 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL358453.1-201ENST00000422522 250 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 TRIM60P13-201ENST00000432350 1283 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 OFD1P3Y-201ENST00000453312 783 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 RPS15AP17-201ENST00000470598 390 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 RNU6-840P-201ENST00000517275 65 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 LINC00933-203ENST00000559812 219 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 AC243960.4-201ENST00000600532 288 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AP002906.1-201ENST00000603405 233 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AC239868.4-201ENST00000608318 671 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AL118556.2-201ENST00000614375 824 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 AC009233.1-201ENST00000616477 371 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC42Q96M95 U2.21-201ENST00000637295 81 ntBASIC1.65□□□□□ -2.15
CCDC42Q96M95 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC42Q96M95 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC42Q96M95 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC42Q96M95 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC42Q96M95 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC42Q96M95 Y_RNA.111-201ENST00000363248 100 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 RNU6-481P-201ENST00000384194 107 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 SNORA70B-201ENST00000384210 135 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 NDUFS5P1-201ENST00000405668 289 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 RNU2-63P-201ENST00000410792 194 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 RNA5SP450-201ENST00000411206 102 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL353729.1-201ENST00000425044 720 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 SKA2P1-201ENST00000425592 390 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 MTCYBP11-201ENST00000447254 1109 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 RNA5SP112-201ENST00000515937 99 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 SNORA76.2-201ENST00000517095 137 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 UBE2L4-201ENST00000587688 464 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC005261.5-201ENST00000596280 355 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL035411.2-201ENST00000604022 421 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 BNIP3P19-201ENST00000605397 577 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AL138478.1-201ENST00000612252 832 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC007490.1-201ENST00000624321 703 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 AC087821.2-201ENST00000637086 450 ntBASIC1.64□□□□□ -2.15
CCDC42Q96M95 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
CCDC42Q96M95 RNU6-778P-201ENST00000363269 103 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 RNU6-748P-201ENST00000384648 107 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 MIR504-201ENST00000385065 83 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 CCNG1P1-201ENST00000406783 885 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 RN7SKP51-201ENST00000410781 304 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 RNU4-27P-201ENST00000410889 139 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC42Q96M95 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC42Q96M95 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC42Q96M95 SNRPEP9-201ENST00000436794 238 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC42Q96M95 AC009238.1-201ENST00000442165 424 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 AC009237.6-201ENST00000446969 424 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 RPL39P6-201ENST00000448289 150 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 COX6CP18-201ENST00000448769 222 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 AMD1P1-201ENST00000457220 922 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.63□□□□□ -2.15
CCDC42Q96M95 MTND4P2-201ENST00000507767 1203 ntBASIC1.63□□□□□ -2.15
CCDC42Q96M95 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC42Q96M95 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms