Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 RNU6-1281P-201ENST00000516223 105 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 RNU1-103P-201ENST00000516502 125 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC007991.1-201ENST00000522680 631 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC087499.8-201ENST00000578406 226 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC138Q96M89 AL162413.1-201ENST00000603198 110 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 AC090517.2-201ENST00000614966 680 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.64□□□□□ -1.83
CCDC138Q96M89 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC138Q96M89 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU6-778P-201ENST00000363269 103 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU4-12P-201ENST00000365233 139 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU1-64P-201ENST00000365443 163 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU1-73P-201ENST00000383971 164 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 U8.11-201ENST00000384699 133 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 U8.12-201ENST00000384701 133 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 MIR548F1-201ENST00000408667 84 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 CYCSP19-201ENST00000411715 316 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 NDUFS5P4-201ENST00000412983 318 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 RPL26P27-201ENST00000414397 437 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 USP9YP27-201ENST00000418455 438 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AL445584.1-201ENST00000431451 330 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 UBE2V1P8-201ENST00000437166 265 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 BRK1P2-201ENST00000442875 223 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 RPL37P4-201ENST00000448908 268 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 SNRPFP3-201ENST00000457792 225 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 U8.18-201ENST00000459285 133 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU7-23P-201ENST00000459465 62 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RPL21P41-201ENST00000459863 264 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 MTND4LP31-201ENST00000514859 294 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 RNU6-703P-201ENST00000516946 107 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 MTND1P5-201ENST00000517906 940 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 MIR548AC-201ENST00000585049 88 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC092794.1-201ENST00000612734 582 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC004852.3-201ENST00000614131 326 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 SNORA50A-202ENST00000629536 136 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 HSPA8P4-201ENST00000511877 1920 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 MAPK10-322ENST00000641485 4530 ntBASIC3.63□□□□□ -1.83
CCDC138Q96M89 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC138Q96M89 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC138Q96M89 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC138Q96M89 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC138Q96M89 GABRG2-229ENST00000641017 3628 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 ELF2P3-201ENST00000445099 1506 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 NACAP2-201ENST00000318548 624 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 RNY4P14-201ENST00000363656 96 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 RN7SKP156-201ENST00000410308 342 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 MTATP6P7-201ENST00000453315 681 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 AL133162.1-201ENST00000463228 453 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AP002884.2-201ENST00000471647 395 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC011352.1-201ENST00000512300 793 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 RNU6-835P-201ENST00000516974 104 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC009902.1-201ENST00000519351 183 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC025755.1-201ENST00000521306 278 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC109635.3-201ENST00000529536 185 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 HIF1AP1-201ENST00000553642 175 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 MIR5692A1-201ENST00000580523 69 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC006130.2-201ENST00000586202 326 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 BNIP3P30-201ENST00000601184 574 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 MTND4LP5-201ENST00000605152 292 ntBASIC3.62□□□□□ -1.83
CCDC138Q96M89 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC138Q96M89 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC138Q96M89 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms