Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX27Q96L92 snoU13.23-201ENST00000458863 104 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 AC084357.1-201ENST00000473404 255 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 AC092989.1-201ENST00000481235 277 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 SNORD27.1-201ENST00000516319 72 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 RN7SKP258-201ENST00000517151 304 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 AC104383.1-201ENST00000530297 370 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 AL512310.1-201ENST00000548639 172 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX27Q96L92 XIST_intron.1-201ENST00000619444 68 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX27Q96L92 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX27Q96L92 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX27Q96L92 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX27Q96L92 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX27Q96L92 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RNU6-179P-201ENST00000363350 107 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RNU6-1322P-201ENST00000364309 107 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RNU4-48P-201ENST00000365559 182 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 Y_RNA.402-201ENST00000383972 102 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RNU6-483P-201ENST00000384088 108 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 SNORA24.1-201ENST00000384401 135 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 MIR454-201ENST00000390180 115 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AL591416.1-201ENST00000404015 867 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RNA5SP508-201ENST00000411327 119 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 OR51A5P-201ENST00000415429 942 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX27Q96L92 AL356867.1-201ENST00000429623 299 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AL139415.2-201ENST00000431968 163 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AL606489.2-201ENST00000433886 234 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 RPL36AP6-201ENST00000435770 321 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 HMGB1P12-201ENST00000438594 598 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AC107083.1-201ENST00000439643 279 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX27Q96L92 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AP001029.3-201ENST00000588063 596 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AC007621.1-201ENST00000604544 437 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 AC007619.2-201ENST00000605743 379 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SNX27Q96L92 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SNX27Q96L92 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 AC093908.1-201ENST00000623125 8092 ntBASIC3.79□□□□□ -1.8
SNX27Q96L92 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNX27Q96L92 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX27Q96L92 AC118273.1-201ENST00000525324 3006 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AL137003.2-201ENST00000606924 2538 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 MTND5P17-201ENST00000418405 1603 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 RNY4P14-201ENST00000363656 96 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 RNU6-1090P-201ENST00000364065 94 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 SNORA62.1-201ENST00000364287 154 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 RNU6-606P-201ENST00000384721 111 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AL513331.1-201ENST00000411908 397 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 USP9YP27-201ENST00000418455 438 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 ZNF90P2-204ENST00000419323 1075 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX27Q96L92 DDX3P2-201ENST00000446138 111 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC104058.1-201ENST00000448028 297 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 RNU7-63P-201ENST00000459054 62 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 MRPS17P3-201ENST00000465453 385 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX27Q96L92 RNU6-1256P-201ENST00000516539 103 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AP006245.1-201ENST00000522549 120 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX27Q96L92 OR5B19P-201ENST00000531766 928 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 OR5AL2P-201ENST00000532185 920 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX27Q96L92 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX27Q96L92 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX27Q96L92 AL157687.1-201ENST00000554853 619 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC024619.4-201ENST00000580924 316 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX27Q96L92 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC002545.1-201ENST00000592511 181 ntBASIC3.78□□□□□ -1.8
SNX27Q96L92 AC093788.1-201ENST00000609356 927 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms