Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL7P50-201ENST00000600588 727 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 AC022441.3-201ENST00000605737 136 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-CQ95604 AC010632.3-201ENST00000611377 369 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-CQ95604 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-CQ95604 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HLA-CQ95604 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-CQ95604 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-CQ95604 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-CQ95604 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 Y_RNA.75-201ENST00000362927 97 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RNU5B-2P-201ENST00000363036 113 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RNU4-84P-201ENST00000364200 139 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RNU4-56P-201ENST00000364700 142 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RNU6-215P-201ENST00000365169 102 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 Y_RNA.357-201ENST00000365487 109 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 U3.22-201ENST00000391120 215 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RPL27AP8-201ENST00000424277 446 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 AC024067.1-201ENST00000426199 223 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RPL23AP95-201ENST00000426806 265 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 AC005154.2-201ENST00000438110 379 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-CQ95604 AC010409.1-201ENST00000487382 476 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 GLUD1P3-202ENST00000508551 200 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 RNA5SP43-201ENST00000516559 110 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-CQ95604 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-CQ95604 AP000769.2-201ENST00000602344 396 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 AC005828.6-201ENST00000606610 232 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
HLA-CQ95604 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HLA-CQ95604 AL445487.1-201ENST00000415694 1580 ntBASIC5.41□□□□□ -1.54
HLA-CQ95604 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-CQ95604 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-CQ95604 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-CQ95604 AL079305.1-201ENST00000623159 3008 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-CQ95604 AC139713.2-214ENST00000642059 1811 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 AL356489.2-201ENST00000566968 3528 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HLA-CQ95604 RNU6-961P-201ENST00000363893 105 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 SNORA29-201ENST00000384183 140 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 U8.10-201ENST00000384260 133 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 RNU6-658P-201ENST00000384606 106 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 RNU6-1248P-201ENST00000391096 64 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 RNA5SP251-201ENST00000410614 137 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 RNA5SP31-201ENST00000411144 127 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 RNU6-1001P-201ENST00000411265 100 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 COX6B1P7-201ENST00000430845 235 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-CQ95604 snoU109.2-201ENST00000459316 135 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-CQ95604 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-CQ95604 AC122688.1-201ENST00000541494 223 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-CQ95604 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-CQ95604 MIR5695-201ENST00000579717 85 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 AL356218.2-201ENST00000605264 187 ntBASIC5.4□□□□□ -1.54
HLA-CQ95604 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-CQ95604 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 SAMMSON-226ENST00000642089 1582 ntBASIC5.4□□□□□ -1.55
HLA-CQ95604 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HLA-CQ95604 AC006484.1-201ENST00000435086 1884 ntBASIC5.4□□□□□ -1.55
HLA-CQ95604 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-CQ95604 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-CQ95604 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HLA-CQ95604 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-CQ95604 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HLA-CQ95604 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 AC118273.1-201ENST00000525324 3006 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-CQ95604 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 Y_RNA.353-201ENST00000365440 108 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 AC079780.1-201ENST00000428259 207 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 RPS27AP9-201ENST00000477681 438 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 BTF3L4P4-201ENST00000506381 449 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms