Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC093012.1-202ENST00000549403 582 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC125611.2-201ENST00000551907 647 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AL121603.1-201ENST00000553815 142 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 PSMA3P-201ENST00000555485 635 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.41□□□□□ -1.7
RTF1Q92541 AF038458.1-201ENST00000588406 262 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.41□□□□□ -1.7
RTF1Q92541 AL162713.1-201ENST00000604480 262 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC093913.1-201ENST00000614178 329 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC091953.5-201ENST00000622919 233 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.41□□□□□ -1.7
RTF1Q92541 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AL513302.2-201ENST00000562313 1842 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTF1Q92541 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTF1Q92541 MTND4P35-201ENST00000604257 1375 ntBASIC4.4□□□□□ -1.7
RTF1Q92541 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RTF1Q92541 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.7
RTF1Q92541 AC103710.2-202ENST00000641454 2853 ntBASIC4.4□□□□□ -1.7
RTF1Q92541 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.4□□□□□ -1.7
RTF1Q92541 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTF1Q92541 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTF1Q92541 MIR124-3-201ENST00000384866 87 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 MIR483-201ENST00000385070 76 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 MIR23A-201ENST00000385245 73 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 RNU4-26P-201ENST00000410270 107 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.4□□□□□ -1.71
RTF1Q92541 SSXP9-201ENST00000417503 292 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AL645937.1-202ENST00000421799 937 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.4□□□□□ -1.71
RTF1Q92541 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.4□□□□□ -1.71
RTF1Q92541 AC008850.1-201ENST00000427546 362 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AL162395.1-201ENST00000457882 422 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 RNU7-180P-201ENST00000459240 63 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AC007547.1-201ENST00000462177 490 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 RPL23AP67-201ENST00000465341 474 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 RPL21P99-201ENST00000480369 423 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.4□□□□□ -1.71
RTF1Q92541 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTF1Q92541 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.4□□□□□ -1.71
RTF1Q92541 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTF1Q92541 MIR3200-201ENST00000580767 85 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.4□□□□□ -1.71
RTF1Q92541 uc_338.5-201ENST00000611839 155 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 MIR7112-201ENST00000616126 65 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
RTF1Q92541 RPS4XP5-202ENST00000449995 1334 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.4□□□□□ -1.71
RTF1Q92541 MTND4P14-201ENST00000435799 1354 ntBASIC4.4□□□□□ -1.71
RTF1Q92541 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.39□□□□□ -1.71
RTF1Q92541 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTF1Q92541 API5P2-201ENST00000397055 1498 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC066616.2-201ENST00000559334 1481 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 RNU4-66P-201ENST00000365199 138 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RTF1Q92541 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTF1Q92541 RNU6-1011P-201ENST00000384668 107 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 RNU6-882P-201ENST00000391025 103 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC110754.1-201ENST00000399740 601 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 RPS20P15-201ENST00000412792 311 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 MTND3P8-201ENST00000412909 339 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 NCOR1P3-201ENST00000420479 303 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC018630.2-202ENST00000422992 927 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.39□□□□□ -1.71
RTF1Q92541 IFNA20P-201ENST00000436840 528 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 SNRPFP3-201ENST00000457792 225 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.39□□□□□ -1.71
RTF1Q92541 SNORA74D-201ENST00000516404 141 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 AC107953.1-201ENST00000522216 297 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 MIR4738-201ENST00000579134 87 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AL132765.2-201ENST00000610812 351 ntBASIC4.39□□□□□ -1.71
RTF1Q92541 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.39□□□□□ -1.71
RTF1Q92541 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.39□□□□□ -1.71
RTF1Q92541 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTF1Q92541 AL157700.1-201ENST00000561973 1432 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.38□□□□□ -1.71
RTF1Q92541 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.38□□□□□ -1.71
RTF1Q92541 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTF1Q92541 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RTF1Q92541 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTF1Q92541 Y_RNA.576-201ENST00000384781 102 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 TXNP7-201ENST00000406296 293 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 RNU6-1148P-201ENST00000410992 104 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.38□□□□□ -1.71
RTF1Q92541 CALM2P2-201ENST00000428512 440 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.38□□□□□ -1.71
RTF1Q92541 USP9YP7-201ENST00000436723 430 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC006028.1-201ENST00000438379 402 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC008264.1-201ENST00000447612 367 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 USP9YP32-201ENST00000452432 430 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms