Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL049734.2-201ENST00000441066 616 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC097493.1-201ENST00000463958 372 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC069528.1-202ENST00000482888 637 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC113347.3-201ENST00000509113 148 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RNA5SP364-201ENST00000516938 78 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RNU6-714P-201ENST00000516963 103 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 MTND1P36-201ENST00000522384 936 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AP003497.1-201ENST00000528472 562 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AP002748.2-201ENST00000528671 348 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 GNAI2P1-201ENST00000541815 315 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC087465.1-201ENST00000560574 245 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AL132657.2-201ENST00000564417 358 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC011451.2-201ENST00000604303 598 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AL158211.4-201ENST00000606988 584 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RNU6-1192P-201ENST00000612197 107 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 RNU6-489P-201ENST00000618289 107 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AL138955.1-201ENST00000622881 1040 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 AP003476.1-201ENST00000623984 516 ntBASIC1.76□□□□□ -2.13
LMX1AQ8TE12 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.76□□□□□ -2.13
LMX1AQ8TE12 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 RNU6-741P-201ENST00000383889 107 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 RNU6-1122P-201ENST00000384449 107 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 RNU6-920P-201ENST00000410926 92 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 TPMTP3-201ENST00000411928 735 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 LARP1BP2-201ENST00000486594 519 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 SUMO2P6-201ENST00000505273 288 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC118942.1-201ENST00000529674 1035 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 MTND3P13-201ENST00000574391 343 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AP001004.1-201ENST00000582468 324 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 VN1R83P-201ENST00000595685 445 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 DUXAP10-204ENST00000612052 616 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AC013476.2-201ENST00000614456 459 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 AL121895.2-201ENST00000619558 447 ntBASIC1.75□□□□□ -2.13
LMX1AQ8TE12 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1AQ8TE12 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC011477.1-204ENST00000623416 1325 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 RNU6-621P-201ENST00000364752 109 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 Z98749.2-208ENST00000381646 500 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 RNU6-14P-201ENST00000384630 106 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 RNU6-754P-201ENST00000391166 107 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AL355497.1-201ENST00000406262 551 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AL592045.1-201ENST00000429867 352 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 Z80107.1-201ENST00000436830 412 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 MTND5P14-201ENST00000441481 1267 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 MTND1P9-201ENST00000453775 944 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 BX322784.1-201ENST00000455793 1077 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AP1S2P1-201ENST00000457344 379 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC079203.1-201ENST00000487972 404 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC138853.1-201ENST00000503549 823 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.74□□□□□ -2.13
LMX1AQ8TE12 AC008837.2-201ENST00000513076 418 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 RNU5F-8P-201ENST00000515941 111 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 RNU6-1256P-201ENST00000516539 103 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 NRON-201ENST00000517270 370 ntBASIC1.74□□□□□ -2.13
LMX1AQ8TE12 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms