Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPL35AP12-201ENST00000425362 338 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 USP9YP7-201ENST00000436723 430 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 USP9YP32-201ENST00000452432 430 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 snoU13.4-201ENST00000458916 104 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 RNU7-180P-201ENST00000459240 63 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC007547.1-201ENST00000462177 490 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 HMGN2P26-201ENST00000463169 339 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 MIR2114-201ENST00000516645 80 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 PSMA2P1-201ENST00000526365 646 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC022690.1-201ENST00000526681 550 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC023050.3-201ENST00000541142 333 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 MIR5004-201ENST00000579078 107 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC013553.2-201ENST00000604244 589 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 RNU6-89P-201ENST00000606519 100 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC012409.4-201ENST00000612923 249 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC005183.1-201ENST00000603687 1979 ntBASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SMC1BQ8NDV3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 RNU4-20P-201ENST00000365601 151 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 RNU6-510P-201ENST00000391239 108 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC006028.1-201ENST00000438379 402 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC025750.2-201ENST00000442609 450 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC092451.1-201ENST00000480211 153 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC098591.2-201ENST00000510152 315 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 RN7SKP60-201ENST00000516985 239 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL137161.1-201ENST00000532231 390 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC078814.3-201ENST00000553036 491 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL360157.1-201ENST00000565962 87 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC008521.1-201ENST00000587471 187 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC067852.3-201ENST00000589177 561 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC110741.2-201ENST00000605278 268 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL670379.4-201ENST00000605279 254 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL158032.1-201ENST00000605401 106 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 HMGB1P50-201ENST00000605814 607 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL390240.1-201ENST00000612950 384 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 uc_338.32-201ENST00000615087 172 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AL359547.2-201ENST00000615810 418 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 AC090617.10-201ENST00000624308 134 ntBASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMC1BQ8NDV3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 Y_RNA.11-201ENST00000362375 109 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 Y_RNA.142-201ENST00000363491 102 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 SNORA32.2-201ENST00000384049 122 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RNU6-38P-201ENST00000384085 107 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RNU6-817P-201ENST00000391083 104 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 HMGB1P37-201ENST00000439613 609 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RNU6-333P-201ENST00000459117 107 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC078817.1-201ENST00000492623 435 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC117522.3-201ENST00000507974 584 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RNU6-685P-201ENST00000517088 95 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 RAB11AP2-201ENST00000545905 639 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC005951.2-201ENST00000576282 495 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 MIR4424-201ENST00000585257 86 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 DPPA3P3-201ENST00000603842 430 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AL138889.2-201ENST00000603883 242 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC007619.2-201ENST00000605743 379 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 SNORA62.6-201ENST00000606322 83 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AC064801.1-201ENST00000612025 407 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 AL136221.1-201ENST00000621449 509 ntBASIC4.37□□□□□ -1.71
SMC1BQ8NDV3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms