Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 SNORA63.4-201ENST00000362763 126 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 RN7SKP153-201ENST00000365026 316 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 MIR600-201ENST00000385007 98 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 MIR589-201ENST00000385238 99 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC119751.6-201ENST00000416712 186 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 PTGES3P4-201ENST00000426243 356 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC016925.1-201ENST00000458303 298 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 snoU13.3-201ENST00000459441 104 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC022441.3-201ENST00000605737 136 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC005520.5-201ENST00000613926 164 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC004825.2-201ENST00000616634 455 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 PHKBP1-201ENST00000450951 1951 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC092593.1-201ENST00000515413 1815 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 AC009812.4-201ENST00000569134 1805 ntBASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCUBE3Q8IX30 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 U3.3-201ENST00000362986 216 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 RNU4-17P-201ENST00000365598 141 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MIR10B-201ENST00000385011 110 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MIR329-1-201ENST00000385028 80 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 SNORA11-201ENST00000408789 128 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 AC005154.2-201ENST00000438110 379 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 RPS29P10-201ENST00000439197 166 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 CYCSP32-201ENST00000440548 321 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 AC005042.3-201ENST00000453230 174 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 FABP5P15-201ENST00000453566 214 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MIR4679-2-201ENST00000578358 77 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MIR5695-201ENST00000579717 85 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 AC007390.2-201ENST00000606229 3803 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 AC126915.2-201ENST00000610957 190 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MIR6839-201ENST00000620425 113 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 OR9K1P-202ENST00000641111 3217 ntBASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.5□□□□□ -1.53
SCUBE3Q8IX30 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 RNA5SP305-201ENST00000362665 119 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 RNU6-275P-201ENST00000364910 107 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 SNORA20-201ENST00000384662 132 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 MIR141-201ENST00000384975 95 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 SNORA48.4-201ENST00000391089 134 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 SNORA40C-201ENST00000391285 128 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 RNU6-1001P-201ENST00000411265 100 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 ELOCP19-201ENST00000411919 318 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC074290.1-201ENST00000448883 135 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC009127.1-201ENST00000467090 155 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 FTH1P11-201ENST00000517577 551 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC022790.1-201ENST00000522872 204 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 MIR4436B2-201ENST00000581415 91 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 MIR4436B1-201ENST00000583272 91 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 AL138820.1-201ENST00000617901 5305 ntBASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SCUBE3Q8IX30 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 RNU4-11P-201ENST00000365287 132 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 EBAG9P1-201ENST00000418955 543 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 EIF1AXP1-201ENST00000419267 435 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AC009220.1-201ENST00000451614 275 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AC006463.2-201ENST00000473326 348 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 AL671862.1-201ENST00000515851 349 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 Y_RNA.797-201ENST00000515977 94 ntBASIC5.48□□□□□ -1.53
SCUBE3Q8IX30 RNA5SP165-201ENST00000517142 115 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms