Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPL21P41-201ENST00000459863 264 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RPL31P41-201ENST00000477967 372 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RPS27AP10-201ENST00000496103 208 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC097462.2-201ENST00000504623 481 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC010546.1-201ENST00000569391 485 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 MIR3682-201ENST00000581338 84 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC121247.2-201ENST00000604776 136 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AL365204.3-201ENST00000612448 685 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AL133173.2-201ENST00000614270 90 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 ATP5A1P2-202ENST00000616464 443 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AL137790.1-201ENST00000634283 177 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 MIR3199-2-201ENST00000636243 86 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC099654.13-201ENST00000639774 207 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 RNU4-21P-201ENST00000362802 126 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 RNU6-960P-201ENST00000364056 120 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 SNORA40.3-201ENST00000390964 122 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 RPL23AP32-201ENST00000395315 459 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 HMGN1P14-201ENST00000412459 517 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AL353729.1-201ENST00000425044 720 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC098614.2-201ENST00000426040 255 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 Z96811.1-201ENST00000445880 108 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 RPS15AP34-201ENST00000487776 387 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 SEM1P1-201ENST00000506694 209 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC060788.1-201ENST00000521318 469 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC137800.2-201ENST00000574375 120 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.09□□□□□ -1.91
PRPF39Q86UA1 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 Z99571.1-201ENST00000636677 394 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 MTND5P42-201ENST00000637720 498 ntBASIC3.09□□□□□ -1.91
PRPF39Q86UA1 MTND4P35-201ENST00000604257 1375 ntBASIC3.09□□□□□ -1.92
PRPF39Q86UA1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRPF39Q86UA1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRPF39Q86UA1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.92
PRPF39Q86UA1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRPF39Q86UA1 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.92
PRPF39Q86UA1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 ADAM3A-203ENST00000461344 2157 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 SNORA80A-201ENST00000363922 136 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 RNY3P9-201ENST00000384727 106 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 RPS3AP3-201ENST00000411933 242 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 SKA2P1-201ENST00000425592 390 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 RPS24P13-201ENST00000442520 397 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 COX6CP2-201ENST00000444980 225 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AL033528.1-201ENST00000453780 140 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC126182.1-201ENST00000478134 357 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AP002453.2-201ENST00000533503 320 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 Z99497.2-201ENST00000603634 310 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AP002360.4-201ENST00000606980 481 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 MIR7106-201ENST00000612419 65 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC130324.3-201ENST00000614165 542 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC084035.1-201ENST00000634543 607 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 AC110994.2-201ENST00000635481 492 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 U6.99-201ENST00000637524 83 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 ELF2P3-201ENST00000445099 1506 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms