Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC007224.1-201ENST00000564410 144 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 MIR5685-201ENST00000579080 79 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL670379.4-201ENST00000605279 254 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL110115.1-201ENST00000614396 364 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC006504.8-201ENST00000621046 635 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 U4.6-201ENST00000621618 127 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL672296.1-201ENST00000427780 2158 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHFQ7M4L6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 RNU6-512P-201ENST00000364438 103 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHFQ7M4L6 RNU6-38P-201ENST00000384085 107 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 MIR141-201ENST00000384975 95 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC016769.2-201ENST00000414815 475 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 RSL24D1P6-201ENST00000426934 401 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AL451062.2-201ENST00000427515 271 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 SRIP2-201ENST00000428470 166 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 HSPD1P21-201ENST00000436541 245 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 HMGB1P12-201ENST00000438594 598 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 RNU6-333P-201ENST00000459117 107 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC018710.1-201ENST00000506509 158 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.13□□□□□ -1.91
SHFQ7M4L6 AL161798.1-201ENST00000604630 131 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 MIR15A-201ENST00000607334 83 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC083809.1-201ENST00000615051 472 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC048347.1-201ENST00000624621 427 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 MTND1P37-201ENST00000636562 264 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AL133383.2-201ENST00000622958 2336 ntBASIC3.13□□□□□ -1.91
SHFQ7M4L6 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC091152.2-201ENST00000591628 2569 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHFQ7M4L6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHFQ7M4L6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 RNU2-33P-201ENST00000410344 192 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC022028.1-201ENST00000412054 408 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC080125.1-201ENST00000414888 684 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL160275.3-201ENST00000423876 471 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC007919.1-201ENST00000429380 217 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC009237.8-201ENST00000445492 379 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC104058.1-201ENST00000448028 297 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 RPL23AP11-201ENST00000475260 469 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 UBE2CP3-201ENST00000502715 450 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 CCDC34P1-201ENST00000507441 517 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 HMGN1P11-201ENST00000508668 303 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC026402.1-201ENST00000513642 170 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 RNU6-914P-201ENST00000516749 109 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL137161.1-201ENST00000532231 390 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 SYF2P1-201ENST00000550658 413 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL118558.2-201ENST00000556294 238 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC136624.4-201ENST00000573044 370 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL138889.2-201ENST00000603883 242 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 RNU6-89P-201ENST00000606519 100 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 uc_338.34-201ENST00000617467 174 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 U6.42-201ENST00000618440 107 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.12□□□□□ -1.91
SHFQ7M4L6 AC009033.1-201ENST00000624279 431 ntBASIC3.12□□□□□ -1.91
SHFQ7M4L6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHFQ7M4L6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms