Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPS24P6-201ENST00000452670 400 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 RNU6-347P-201ENST00000516658 105 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 RNU6-928P-201ENST00000516876 104 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13CQ709C8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 SNORA16B-201ENST00000364674 135 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 RNA5SP189-201ENST00000364920 115 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
VPS13CQ709C8 HSBP1P1-201ENST00000555205 166 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13CQ709C8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.39□□□□□ -2.35
VPS13CQ709C8 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
VPS13CQ709C8 Y_RNA.18-201ENST00000362461 102 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 MRPL35P1-201ENST00000404272 572 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AC073464.3-201ENST00000422564 712 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AL096840.1-201ENST00000603287 93 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13CQ709C8 AP003122.6-201ENST00000623831 495 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 RNA5SP368-201ENST00000364298 116 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 MIR515-2-201ENST00000384883 83 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 MIR515-1-201ENST00000384884 83 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 MTCO1P3-201ENST00000429327 192 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 RPL39P29-201ENST00000447779 157 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 PRELID3BP1-201ENST00000457142 540 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AP003355.1-201ENST00000518956 587 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 MTCYBP23-201ENST00000558717 1102 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 OR5H6-203ENST00000642105 978 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 RNU6-72P-201ENST00000384285 79 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 RNU6-39P-201ENST00000384344 107 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 MTCO1P56-201ENST00000401674 224 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AL161449.1-201ENST00000414531 1199 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AC009302.1-201ENST00000417147 390 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AC073614.1-201ENST00000438690 650 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 RRN3P3-201ENST00000549207 578 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS13CQ709C8 AL137003.2-201ENST00000606924 2538 ntBASIC0.38□□□□□ -2.35
VPS13CQ709C8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13CQ709C8 RNU4-67P-201ENST00000364569 141 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC106901.1-201ENST00000425086 698 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 SNRPEP7-201ENST00000438350 220 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13CQ709C8 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13CQ709C8 uc_338.14-201ENST00000613162 166 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC073569.3-201ENST00000619055 682 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VPS13CQ709C8 RNU6-185P-201ENST00000384421 107 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 RABEPKP1-201ENST00000440529 1026 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC025857.1-201ENST00000525252 377 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AL160236.1-201ENST00000556317 195 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 MIR4287-201ENST00000579398 78 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC245128.3-201ENST00000594721 748 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13CQ709C8 AC009974.1-201ENST00000608881 455 ntBASIC0.37□□□□□ -2.35
VPS13CQ709C8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
VPS13CQ709C8 RNU4-42P-201ENST00000364738 142 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 MIR146A-201ENST00000385201 99 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
VPS13CQ709C8 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AL606489.2-201ENST00000433886 234 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 HMGB3P10-201ENST00000434734 572 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AL353706.1-201ENST00000436728 494 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC243772.1-201ENST00000451620 410 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC027575.1-201ENST00000481064 460 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 ELOCP5-201ENST00000604924 333 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AL355802.3-201ENST00000607571 545 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC107214.2-201ENST00000608204 634 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC006065.5-201ENST00000623427 349 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC008163.1-202ENST00000636004 2889 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 RNU6-19P-201ENST00000384718 107 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AL356776.1-201ENST00000406574 447 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13CQ709C8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
VPS13CQ709C8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13CQ709C8 HMGB1P46-201ENST00000520062 610 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
VPS13CQ709C8 ZNF29P-201ENST00000225587 168 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 SNORA51.6-201ENST00000384151 125 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS13CQ709C8 AC073055.1-201ENST00000456901 1621 ntBASIC0.36□□□□□ -2.35
VPS13CQ709C8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 UBE2V2P3-201ENST00000433562 437 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms