Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RAP1BP3-201ENST00000407180 549 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RNU2-36P-201ENST00000410361 191 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 SDCBPP3-201ENST00000419629 891 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 SNRPEP10-201ENST00000420249 274 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RPL7P46-201ENST00000425129 740 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 OR2AS1P-201ENST00000427827 319 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 MED13P1-201ENST00000428342 171 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 MRPS31P2-201ENST00000451581 518 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RNU7-63P-201ENST00000459054 62 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RN7SL293P-201ENST00000481765 281 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RN7SKP18-201ENST00000516005 275 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 SNORD27.1-201ENST00000516319 72 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RNU7-51P-201ENST00000516560 62 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 RNU6-579P-201ENST00000516879 102 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC005730.3-201ENST00000583067 366 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 U3.45-201ENST00000607547 219 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AC073308.1-201ENST00000623696 305 ntBASIC4.05□□□□□ -1.76
LONRF3Q496Y0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.05□□□□□ -1.76
LONRF3Q496Y0 AL049641.1-201ENST00000441055 1948 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 RNU6-451P-201ENST00000362921 107 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 RNU6-606P-201ENST00000384721 111 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL359634.1-202ENST00000404721 284 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC012498.1-201ENST00000424037 437 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 CALM1P1-201ENST00000442082 433 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 RPS3AP46-201ENST00000448352 682 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 HMGB3P8-201ENST00000449709 577 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL356010.1-201ENST00000456364 102 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC233702.1-201ENST00000482905 502 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC093331.1-201ENST00000521474 169 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AF235103.2-201ENST00000525753 346 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 OR5B10P-201ENST00000532869 642 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 NUTF2P8-201ENST00000604593 363 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL035413.2-201ENST00000604801 525 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC025253.1-201ENST00000613623 543 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AL354950.2-201ENST00000617939 290 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 AC024614.3-201ENST00000637860 256 ntBASIC4.04□□□□□ -1.76
LONRF3Q496Y0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.04□□□□□ -1.76
LONRF3Q496Y0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC091564.4-201ENST00000533934 2194 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 Y_RNA.70-201ENST00000362886 110 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 RNU4-48P-201ENST00000365559 182 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 MIR218-2-201ENST00000385006 110 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 U3.39-201ENST00000408569 239 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 OR51A5P-201ENST00000415429 942 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC073063.1-201ENST00000434352 607 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 MTATP6P16-201ENST00000434543 526 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 DDX3P2-201ENST00000446138 111 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 PRDX3P3-201ENST00000447765 522 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 CACYBPP2-201ENST00000453625 678 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC006512.1-201ENST00000468816 291 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC026427.2-201ENST00000506228 536 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC018710.1-201ENST00000506509 158 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC025465.4-201ENST00000513422 638 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 RNA5SP401-201ENST00000515920 127 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 SNORA70.18-201ENST00000516696 98 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC026333.2-201ENST00000542164 106 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms